Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq277 242 5e-59 seq285 158 2e-33 >seq277 Length=119773 Score = 242 bits (268), Expect = 5e-59 Identities = 736/1120 (66%), Gaps = 44/1120 (4%) Strand=Plus/Minus Query 62824 CTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 62883 |||||||||||| | ||| | || || ||||| ||| |||||||| || || || Sbjct 80827 CTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCAT 80768 Query 62884 GAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCT 62942 ||| || ||||||| || |||||| || | ||| || | ||| | | || |||||| Sbjct 80767 GAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAA-GCTTCTGAGCCT 80709 Query 62943 TTATTATA-GA------TTTGTATCTCTTTTCT--CTT-TCGTATAGTGTATACAATCGT 62992 |||| || || ||| | | |||||| ||| ||||| || | | ||| Sbjct 80708 TTATGGTACGACGGCCCTTTCCAGC-CTTTTCATACTTCTCGTAAAGAGCCTCAAAT--- 80653 Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 || ||||| |||| | | || ||||| ||||| | || ||||| | | | Sbjct 80652 ------TCATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATAAGTGTC 80599 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112 || || | || | || || || ||||| || ||||| ||||||||||| || || || Sbjct 80598 CAATCAGCATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGAAA 80539 Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63172 ||||| | | | | || || || || ||| || || |||| || | | Sbjct 80538 AGATCGCGTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATAAAGTCGAAC 80479 Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63232 | ||| ||||||||| || | ||| ||||| | | ||||| || ||||| || || Sbjct 80478 ACATCGTCATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTCCCACCT 80419 Query 63233 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 63292 || || | ||| | ||| ||||| || || || | |||||| |||| ||| ||||| || Sbjct 80418 TGGTCGACGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATCCCATTCGAG 80359 Query 63293 GTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTA--CTAATTGATAGAC 63350 || || || || || | ||||| ||| | || || || ||| | | ||| | | Sbjct 80358 GTTCCGTTCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCACACTGA--GCC 80301 Query 63351 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 63410 | || || || || || ||||| | ||||| | || | ||||| || || |||| Sbjct 80300 CAATCCCACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTAAATACCCT 80241 Query 63411 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGA-CATTTGGTGACGACTAGTT 63469 | ||| ||| ||| ||||||| | || || || | || ||| || | |||| Sbjct 80240 CAATAGAATCGTCCTTCATGTTTACGAGGAAGCA-CGAGCTCATCTGAGGCTTTGGAGTT 80182 Query 63470 CCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTAC 63529 || ||||| | ||||| || || ||||| || || |||| | || | || ||||| Sbjct 80181 CCTGCATTGTACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGACATAAGGTTGTAA 80122 Query 63530 GTCTCAATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACA 63587 ||||| | || | ||| || || | |||||| || | | ||| ||||| | || Sbjct 80121 GTCTCTACGACTTTGGGTATGTC--ATCGCCATGAATACCAATGGAGACGCGCATGATCA 80064 Query 63588 TGTGCTGAGGTCTTTCAACGATCTTGTTG-TTTATTTTCAACAAGTAGGATTTTTCCAAA 63646 | |||||||| | || || ||| | |||| ||||| ||||||||| || | Sbjct 80063 TATGCTGAGGGCGCTCGT-GAACTTTTCCATTTAGTTTCAGCAAGTAGGAGCGCTCTAGC 80005 Query 63647 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 63706 ||||| ||||||||||||||||| ||||| || || |||| || | |||||||| Sbjct 80004 GTTTTGAAACCAAAATAGTTGTAATTGAAGTCACGATCATAAACGATGGCAGAGTTGAGC 79945 Query 63707 TTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-----GAAATAATAGGAAAAT 63761 | || || || | || || || || |||| | ||||| || ||| ||| Sbjct 79944 TCTTCAGCATGCTTCTGGACAACGTC----GT-ATACCTCTTGGGAAATCATTGGAGAAT 79890 Query 63762 GTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 63821 | || |||| |||||| |||||| ||| | |||||| || || | || || | || Sbjct 79889 GCTTGTCATTGCGAGGATTCACATAGCGGAAAAGATCCTCAATGACCTGGCTGAACACTT 79830 Query 63822 tttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCG 63881 ||||||| | |||||| ||||| || || || |||| || || || |||||| || | Sbjct 79829 TTTTTGTCTGTTTGTGGAGATTAGACACTGCAATTCGTGCAGCAAGCTGGGCATAGTCAG 79770 Query 63882 GATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAG 63921 | || ||||| | || ||| | ||||| ||||| Sbjct 79769 GGTGGACCGTAGTCATTGACGCAGCTGTCTCGGCAGCCAG 79730 Score = 102 bits (112), Expect = 1e-16 Identities = 149/207 (72%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909 ||||||||||| || || || |||| || || || ||||||||||| || || || || Sbjct 81816 GTGAATTGAATCGGTGCCGAAGCGGCTTGAGTGCGCAGATAGTACATACCGGTCTTGAGC 81757 Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG--GAATAACTCGGATCTGCTA 61967 || | ||| ||||| || ||||||||||| || ||| | | |||| ||| | Sbjct 81756 CCTTTAGACCAGCCGTAGAAGTGCATACTCGTAAGCTTGCCCATTGTGGGGGAT-TGC-A 81699 Query 61968 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 62027 ||| ||| |||| | |||||||| |||||||| | ||| ||| | || ||||| | | Sbjct 81698 TATAGATGTTCAGACTCTGACTTTGGTCGATGAAAGGTCCTCTGCCAGCGGCCATATCGA 81639 Query 62028 TAATCGTCTTTTGTGGAATTTCCCAAA 62054 ||||| |||||| || ||||||| Sbjct 81638 TAATCACCTTTTGACTGATCTCCCAAA 81612 >seq285 Length=150650 Score = 158 bits (174), Expect = 2e-33 Identities = 411/625 (66%), Gaps = 20/625 (3%) Strand=Plus/Plus Query 32660 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 32719 ||| || |||||| ||| | |||||| || | ||| | ||||||||| || || || Sbjct 139065 ACAGGCAAAATCGGTGTGCATACCCTCATCGCGCGAAATCAGTTCGTTGGAGAAAGTAAG 139124 Query 32720 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 32779 || ||||| || ||||||||||| ||||| || || || ||||| || ||| ||||| Sbjct 139125 CCCAGGCATGAGCCCACGCTTTTTCAGCCAGAAGATTGATGCAAACGAGCCACTGAAGAA 139184 Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---------ACCGGCGCT 32830 | ||||| || || || |||||||| || | |||| | | | || |||| Sbjct 139185 GACACCTTCAACAGCAGCGAAGGCAATTAGGCGCTCTGCGAAGGTAGACTCAGCGTCGCT 139244 Query 32831 GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTAT 32890 | ||||| | ||||| | |||||||| | | || || || || Sbjct 139245 G------ATCCAACGAAGTGCCCACTTAGCCTTCTTGCGAATGGAGGGAATGGTGAAGAT 139298 Query 32891 AGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACT 32950 || || || ||| ||| || ||||| ||||| || ||||||||||||| |||| Sbjct 139299 GGCGTTGAACAGAAAGTCGGCCTCTTTACTGTCTTTCACGTATGTATCAATCAGAAGAGA 139358 Query 32951 ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTC 33010 ||| | || || ||||||||||| || || || || |||||||| ||| | ||||| Sbjct 139359 ATAAGTCTCAGAGTGAATGTTTTCCATCATAATCTGGAAGCCGTAGAAACATTTGGCCTC 139418 Query 33011 GGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACT 33070 || ||| || || || ||||| || | | ||| ||||| || || || ||||| Sbjct 139419 GGGAATACCAACCTCACCACTGAATCGCTCAACGAGATTCTCATTGACAATGCCATCACT 139478 Query 33071 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC-TGGTGTTAGTTT-- 33127 || ||||| || || | ||| | | ||| ||| | ||||| | || | || || Sbjct 139479 AGCAGCAAAGAAAGCAAGAACACGGGACACAAAGTATCTCTCGTCATCGT-TCAGCTTGT 139537 Query 33128 -ATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 33186 | ||| || | | || ||| || || | ||| || | ||||||||||| |||| Sbjct 139538 GCTCCCAGTCGTGAGTGTCCTTACCTAGGTCAATTTCCTCGGCCGTCCAAAATGACGCCT 139597 Query 33187 CTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTAT 33246 | || || || || | ||| || | || | || || || | |||||| | | Sbjct 139598 CGGCTTTCTTGTAAGCCTGCCAAATCGAGTTGTACTTGATCGGGAACAAAACAAACCGGT 139657 Query 33247 TTGGATTTTTTGCAAGGATTGGTTC 33271 ||||||||| |||||| || || Sbjct 139658 TTGGATTTTCCTGAAGGATGGGCTC 139682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633629663482000