Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq285 147 4e-30
>seq285
Length=150650
Score = 147 bits (162), Expect = 4e-30
Identities = 363/542 (67%), Gaps = 13/542 (2%)
Strand=Plus/Minus
Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668
|||||||| ||||| || || |||| ||| |||||||| | ||||| ||
Sbjct 139310 CTGTTCAACGCCATCTTCACCATTCCCTCCATTCGCAAGAAGGCTAAGTGGGCACTTCGT 139251
Query 42669 TGGATCGAGAGTCCC-GACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGA 42727
|||||| || | | | || | || |||| ||| | || | ||||| | || || ||
Sbjct 139250 TGGATC-AGCGACGCTGAGTCTACCTTCGCAGAGCGCCTAATTGCCTTCGCTGCTGTTGA 139192
Query 42728 GGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGAT 42787
|| |||||||| ||| | || || || ||||||||||| || || | | ||
Sbjct 139191 AGGTGTCTTCTTCAGTGGCTCGTTTGCATCAATCTTCTGGCTGAAAAAGCGTGGGCTCAT 139132
Query 42788 GCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTT 42847
||| || || || ||||| |||||||| || | || ||||| |||| | || ||
Sbjct 139131 GCCTGGGCTTACTTTCTCCAACGAACTGATTTCGCGCGATGAGGGTATGCACACCGATTT 139072
Query 42848 TGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA--GCCCTCGAAG-GAGCGGGTCCG 42904
|||||| ||||| ||| |||||| | ||| || ||||| | | | ||
Sbjct 139071 TGCCTGTCTCCTATTC---AGCCACTT---GCAGAACCGCCCTAGCCGTGCTATCGTTGA 139018
Query 42905 GGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGT-CGCTGCCCG 42963
| |||||||| || ||||| || || ||| | || | | || ||| | | |||| |
Sbjct 139017 GAGAATCATCACTGAAGCCGTCGACATTGAGCAAGAATACTTC-CGCGATGCTTTGCCTG 138959
Query 42964 TGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACC 43023
| || ||||||||||| |||||||||| | | || || ||| |||||||||||
Sbjct 138958 TAAGTCTTCTCGGCATGAACGCCGACCTCATGAACCAATATGTCGAGTTCGTCGCCGACC 138899
Query 43024 ATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTA 43083
| | |||| |||| | || ||| ||||||| | | || || |||||||
Sbjct 138898 GTTTGCTGTTGGCTTTGGGCCACAAGCGCGTCTACAATGTGACCAATCCGTTTGACTTTA 138839
Query 43084 TGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACC 43143
||||||||||||| | | || |||||||| || || ||||| || || | |||||||
Sbjct 138838 TGGAGAACATCTCTCTTGCTGGAAAGACCAATTTCTTTGAGAAACGTGTTTCAGACTACC 138779
Query 43144 AG 43145
||
Sbjct 138778 AG 138777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944335717749200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |