Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq285 147 4e-30 >seq285 Length=150650 Score = 147 bits (162), Expect = 4e-30 Identities = 363/542 (67%), Gaps = 13/542 (2%) Strand=Plus/Minus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 |||||||| ||||| || || |||| ||| |||||||| | ||||| || Sbjct 139310 CTGTTCAACGCCATCTTCACCATTCCCTCCATTCGCAAGAAGGCTAAGTGGGCACTTCGT 139251 Query 42669 TGGATCGAGAGTCCC-GACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGA 42727 |||||| || | | | || | || |||| ||| | || | ||||| | || || || Sbjct 139250 TGGATC-AGCGACGCTGAGTCTACCTTCGCAGAGCGCCTAATTGCCTTCGCTGCTGTTGA 139192 Query 42728 GGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGAT 42787 || |||||||| ||| | || || || ||||||||||| || || | | || Sbjct 139191 AGGTGTCTTCTTCAGTGGCTCGTTTGCATCAATCTTCTGGCTGAAAAAGCGTGGGCTCAT 139132 Query 42788 GCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTT 42847 ||| || || || ||||| |||||||| || | || ||||| |||| | || || Sbjct 139131 GCCTGGGCTTACTTTCTCCAACGAACTGATTTCGCGCGATGAGGGTATGCACACCGATTT 139072 Query 42848 TGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA--GCCCTCGAAG-GAGCGGGTCCG 42904 |||||| ||||| ||| |||||| | ||| || ||||| | | | || Sbjct 139071 TGCCTGTCTCCTATTC---AGCCACTT---GCAGAACCGCCCTAGCCGTGCTATCGTTGA 139018 Query 42905 GGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGT-CGCTGCCCG 42963 | |||||||| || ||||| || || ||| | || | | || ||| | | |||| | Sbjct 139017 GAGAATCATCACTGAAGCCGTCGACATTGAGCAAGAATACTTC-CGCGATGCTTTGCCTG 138959 Query 42964 TGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACC 43023 | || ||||||||||| |||||||||| | | || || ||| ||||||||||| Sbjct 138958 TAAGTCTTCTCGGCATGAACGCCGACCTCATGAACCAATATGTCGAGTTCGTCGCCGACC 138899 Query 43024 ATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTA 43083 | | |||| |||| | || ||| ||||||| | | || || ||||||| Sbjct 138898 GTTTGCTGTTGGCTTTGGGCCACAAGCGCGTCTACAATGTGACCAATCCGTTTGACTTTA 138839 Query 43084 TGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACC 43143 ||||||||||||| | | || |||||||| || || ||||| || || | ||||||| Sbjct 138838 TGGAGAACATCTCTCTTGCTGGAAAGACCAATTTCTTTGAGAAACGTGTTTCAGACTACC 138779 Query 43144 AG 43145 || Sbjct 138778 AG 138777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944335717749200