Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq289 125 6e-24 >seq289 Length=181150 Score = 125 bits (138), Expect = 6e-24 Identities = 361/551 (66%), Gaps = 26/551 (5%) Strand=Plus/Plus Query 20227 CCCGGGTCTAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAAT 20286 |||||| ||| || || || || |||| ||| | ||| || | | ||| ||||| Sbjct 142755 CCCGGGAGCAAG-CCGGTGACGTGCGCAATCATTTTAGTCAATAATGCGTAGGATGCAAT 142813 Query 20287 GTTAAAAGGAACTCCCAAACCCATGTCTCC-CGACCTCTGATACAGCTGACAGGAAAG-- 20343 ||| || |||||||| | ||||| ||||| | || | ||||||| ||||||| || Sbjct 142814 GTTGAAGGGAACTCCAAGGCCCATATCTCCACTACGT-TGATACATCTGACAGTTGAGGT 142872 Query 20344 -------------CTCACCGT----CA--GCTACATAAAATTGACATAACAAGTGACAGG 20384 |||||| | || | || |||||||||| || | ||| || | Sbjct 142873 ATTTTGGGCCTTGCTCACCTTTCGGCATTGAAACGTAAAATTGACTCAATATGTGGCATG 142932 Query 20385 GCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATAATGATTCTTCTAT 20444 ||||||| ||||| || | | | || || ||||||||| | | ||| |||||||| Sbjct 142933 GCGGAAGAGCCATAAAACGCTCGGCTGCGGGATTCCACGCAGATAAAATAATTCTTCTCG 142992 Query 20445 CGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCAAACCCCTGGCCTG 20504 || || | | ||||||| | | | | | ||| ||||||| || | |||| Sbjct 142993 AGTAGGGGTCACTTTTTATAAGCTTAATCACCTCATTCAACTGGTCAACACCTTCACCTG 143052 Query 20505 TATAGTCAGCATCCGCGTCCACG-TACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAA 20563 ||||||| |||| ||| ||||| ||| | || ||||| || | ||||||||| || ||| Sbjct 143053 TATAGTCTGCAT-CGCAGCCACGATACTCTGCACCAAAATGGCGCCACTGGAATCCATAA 143111 Query 20564 ACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTG 20623 || |||||||| || |||||||| | | || || || | ||||| || ||| Sbjct 143112 ACCGGTCCCAAGTCGCCCTCCCTGTTACTTGTGAGCCCACGTTTATCAAGGAAGTCTCTG 143171 Query 20624 GAGCCATTTTTGTCCCATATCTTGACTCCTGTTCTTGAAAGCTCCCTGGAGTCAGTACTC 20683 |||||| ||||| || | | | | ||| | ||| | | || || Sbjct 143172 CTCCCATTTCCATCCCAGATATGTATATCCCTCGCTGACAACTCTTTCGCATCGGTTGAG 143231 Query 20684 CCCTTCAGAAACCAAAGCAGCTCTTGCACTACGCCTCGCCAAAACACCCGCTTTGTGGTT 20743 ||||| | |||||||||||||| || | || || || | || ||||| || || Sbjct 143232 CCCTTGACGAACCAAAGCAGCTCCTGAGCAACTCCCCGAAAGAATGTGCGCTTGGTTGTG 143291 Query 20744 AGTAAGGGAAA 20754 ||||||||||| Sbjct 143292 AGTAAGGGAAA 143302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441371172437800