Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq289 125 6e-24
>seq289
Length=181150
Score = 125 bits (138), Expect = 6e-24
Identities = 361/551 (66%), Gaps = 26/551 (5%)
Strand=Plus/Plus
Query 20227 CCCGGGTCTAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAAT 20286
|||||| ||| || || || || |||| ||| | ||| || | | ||| |||||
Sbjct 142755 CCCGGGAGCAAG-CCGGTGACGTGCGCAATCATTTTAGTCAATAATGCGTAGGATGCAAT 142813
Query 20287 GTTAAAAGGAACTCCCAAACCCATGTCTCC-CGACCTCTGATACAGCTGACAGGAAAG-- 20343
||| || |||||||| | ||||| ||||| | || | ||||||| ||||||| ||
Sbjct 142814 GTTGAAGGGAACTCCAAGGCCCATATCTCCACTACGT-TGATACATCTGACAGTTGAGGT 142872
Query 20344 -------------CTCACCGT----CA--GCTACATAAAATTGACATAACAAGTGACAGG 20384
|||||| | || | || |||||||||| || | ||| || |
Sbjct 142873 ATTTTGGGCCTTGCTCACCTTTCGGCATTGAAACGTAAAATTGACTCAATATGTGGCATG 142932
Query 20385 GCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATAATGATTCTTCTAT 20444
||||||| ||||| || | | | || || ||||||||| | | ||| ||||||||
Sbjct 142933 GCGGAAGAGCCATAAAACGCTCGGCTGCGGGATTCCACGCAGATAAAATAATTCTTCTCG 142992
Query 20445 CGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCAAACCCCTGGCCTG 20504
|| || | | ||||||| | | | | | ||| ||||||| || | ||||
Sbjct 142993 AGTAGGGGTCACTTTTTATAAGCTTAATCACCTCATTCAACTGGTCAACACCTTCACCTG 143052
Query 20505 TATAGTCAGCATCCGCGTCCACG-TACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAA 20563
||||||| |||| ||| ||||| ||| | || ||||| || | ||||||||| || |||
Sbjct 143053 TATAGTCTGCAT-CGCAGCCACGATACTCTGCACCAAAATGGCGCCACTGGAATCCATAA 143111
Query 20564 ACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTG 20623
|| |||||||| || |||||||| | | || || || | ||||| || |||
Sbjct 143112 ACCGGTCCCAAGTCGCCCTCCCTGTTACTTGTGAGCCCACGTTTATCAAGGAAGTCTCTG 143171
Query 20624 GAGCCATTTTTGTCCCATATCTTGACTCCTGTTCTTGAAAGCTCCCTGGAGTCAGTACTC 20683
|||||| ||||| || | | | | ||| | ||| | | || ||
Sbjct 143172 CTCCCATTTCCATCCCAGATATGTATATCCCTCGCTGACAACTCTTTCGCATCGGTTGAG 143231
Query 20684 CCCTTCAGAAACCAAAGCAGCTCTTGCACTACGCCTCGCCAAAACACCCGCTTTGTGGTT 20743
||||| | |||||||||||||| || | || || || | || ||||| || ||
Sbjct 143232 CCCTTGACGAACCAAAGCAGCTCCTGAGCAACTCCCCGAAAGAATGTGCGCTTGGTTGTG 143291
Query 20744 AGTAAGGGAAA 20754
|||||||||||
Sbjct 143292 AGTAAGGGAAA 143302
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441371172437800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |