Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq54 89.7 1e-12
seq253 87.8 4e-12
>seq54
Length=1817
Score = 89.7 bits (98), Expect = 1e-12
Identities = 109/142 (77%), Gaps = 5/142 (4%)
Strand=Plus/Plus
Query 183641 GAGCTTGGCTGCGGATCGCCCATA-TATC-TCTGTGAA-TTTTTACCGTACACGAGTTC- 183696
|||||||||||||||| |||||| || | ||| | || |||||||| ||| | | ||
Sbjct 1554 GAGCTTGGCTGCGGATTGCCCATTGTAACATCTTTCAAGTTTTTACCATACCCAGGGTCA 1613
Query 183697 TGCTCTCGTCCATC-ATAATGTTTCCACGATGATTTGGTATCACAAGCTTTAGGGGGTTC 183755
| |||| ||| | | |||||||||| | ||||||| ||||||||||| || |
Sbjct 1614 TTAACTCGGCCACCGACTGTGTTTCCACGCCGGCTTGGTATTGAAAGCTTTAGGGTGTCC 1673
Query 183756 CCGCAATTTGACAGTGTCGCAA 183777
||||||||||| ||||||||||
Sbjct 1674 CCGCAATTTGATAGTGTCGCAA 1695
>seq253
Length=72852
Score = 87.8 bits (96), Expect = 4e-12
Identities = 126/176 (72%), Gaps = 4/176 (2%)
Strand=Plus/Minus
Query 334181 GGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCC 334240
|||||| || |||| ||| || | |||| || ||||| ||||| || ||||| || ||
Sbjct 20632 GGGGAAGCCCTCAACCTGGCCCTCAGCAATGGCACGCATAAGAGTGGACTTACCAGCACC 20573
Query 334241 GTTTGGCCCACACAGACCGTAGCG--GTTTCCACGCTTCAGATTGAACCGCGTATTGTTC 334298
||| || ||||||| ||||| || | || | |||| || | | | ||| ||||
Sbjct 20572 GTTGGGTCCACACAAGCCGTATCGACGGTTGC--GCTTGAGGCGCATCTGAGTACGGTTC 20515
Query 334299 AGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354
|| ||||| || ||||||| || || || || || || | || |||||||||||
Sbjct 20514 AGCAGAATCTTAGCACCATAGGCGAGCGAGAACTCGCAGTTGCAGAGATCCTCACC 20459
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102875831458250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |