Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq295 109 5e-19
seq274 98.7 1e-15
seq212 87.8 2e-12
>seq295
Length=432776
Score = 109 bits (120), Expect = 5e-19
Identities = 144/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || ||||| |||||||| || | | || || | || ||||||||||||||
Sbjct 305642 GTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGACCATCGTCAAGCTGCTTGCCA 305701
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | ||||| ||||| ||||| || ||||||||||| || || || || |||
Sbjct 305702 GCAAAGATGAGACGCTGTTGGTCAGGGGGAATTCCTTCCTTGTCAGAGATCTTACTCTTG 305761
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| |||| | || || | | || ||||||| || | ||||||||| || || ||
Sbjct 305762 ACAGCCTCAATGGTGTCGCTAGACTCTACTTCTAGCGTAATGGTCTTGCCCGTTAACGTC 305821
Query 64427 TTTACGAAAATTTGCATTTT 64446
|| | |||||| ||||| ||
Sbjct 305822 TTGATGAAAATCTGCATCTT 305841
>seq274
Length=107525
Score = 98.7 bits (108), Expect = 1e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | |||| || || || || ||||||||||| || | | |||||| | ||
Sbjct 41928 AGCACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCATCA 41987
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||||||||||||||| | || || ||||||||||| || || || || || || ||
Sbjct 41988 TCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTATCG 42047
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || ||| ||| |||| | || |||| | ||||| || | || | |||
Sbjct 42048 CTGATCTTGCTCTTCACAGCCTCGATGGTGTCACTCGACTCCACCTCGAGGGTAATAGTC 42107
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || |||| ||||| | ||| || |||||
Sbjct 42108 TTACCCGTCAGGGTTTTAATGAAGATCTGCAT 42139
>seq212
Length=31356
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
|||||| | || | ||| || || || || |||||||| || | || |||||| | ||
Sbjct 28264 AAGCACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 28205
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|| |||||||||||||| | || || ||||||||||| || ||||| ||||| || ||
Sbjct 28204 GTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGAATGCCTTCCTTGTC 28145
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| || ||| ||| |||| | || || | | || || || | || | ||
Sbjct 28144 GCTGATCTTGCTCTTCACAGCCTCGATCGTGTCGCTAGACTCGACCTCAAGGGTGATAGT 28085
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| || || | || || | ||| || |||||
Sbjct 28084 CTTCCCCGTGAGGGTCTTGATGAAGATCTGCAT 28052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499642957559800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |