Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq295 105 7e-18 seq274 98.7 1e-15 >seq295 Length=432776 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| || | ||| | ||| ||||| | | ||||||||||| |||||||||||| Sbjct 305611 GCCGCCACGGAGACGTAGAACCAAATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCGGA 305670 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | |||||| || || || || || || | | |||| |||||||||||||| || || Sbjct 305671 AAGAGTACGACCATCGTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGGGG 305730 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| | ||| || || | || | ||||||| | ||||| || Sbjct 305731 AATTCCTTCCTTGTCAGAGATCTTACTCTTGACAGCCTCAATGGTGTCGCTAGACTCTAC 305790 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | ||| | || || || || | || || | ||||||||||| Sbjct 305791 TTCTAGCGTAATGGTCTTGCCCGTTAACGTCTTGATGAAAATCTGCAT 305838 >seq274 Length=107525 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||||||||||||| | || || || || || || || |||| Sbjct 41946 GACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCATCATCAAGCTGCTTGCCGGCG 42005 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||| || || || || || || ||| |||| || || | Sbjct 42006 AAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTATCGCTGATCTTGCTCTTCACA 42065 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || | |||||| ||||||||||||||| || | || ||||| ||||| ||||| Sbjct 42066 GCCTCGATGGTGTCACTCGACTCCACCTCGAGGGTAATAGTCTTACCCGTCAGGGTTTTA 42125 Query 138601 ACAAAAATCTGCAT 138614 | || |||||||| Sbjct 42126 ATGAAGATCTGCAT 42139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496260570032400