Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq277 102 1e-16
>seq277
Length=119773
Score = 102 bits (112), Expect = 1e-16
Identities = 278/422 (66%), Gaps = 4/422 (1%)
Strand=Plus/Minus
Query 203884 CAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAG 203943
|||||||||||| |||||||| || || || ||| ||||| | |||||| | ||
Sbjct 81781 CAGATAGTACATACCGGTCTTGAGCCCTTTAGACCAGCCGTAGAAGTGCATACTCGTAAG 81722
Query 203944 TTTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGG 204003
|||| || ||||| ||| | ||||||||| ||| |||||||||||||||||
Sbjct 81721 CTTGCCCATTGTGGGGGATTGCATATAGATGTTCAGACTCTGACTTTGGTCGATGAAAGG 81662
Query 204004 CGCCCGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAA 204063
| | | |||||||||| |||||| ||| || |||||||| || |||||| |
Sbjct 81661 TCCTCTGCCAGCGGCCATATCGATAATCACCTTTTGACTGATCTCCCAAACTGTCTTGTA 81602
Query 204064 CACGTCTCTGGTGTGTTGAGGCACATC-TTCCCACGTCC-TGATCGAGCCGTTGTCGGCC 204121
| |||| || || | ||| ||| | |||| | |||||||| |||
Sbjct 81601 GAGGTCTTTGAGGTCATCAGG--AATCGAGGGAATGTCCTTAATCGAGCCCCCAGAGGCA 81544
Query 204122 ATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGG 204181
| || | || || | || || ||| | ||||| || || ||| || ||
Sbjct 81543 ACGAGACGGTTCTTCATGTCGTCGTTCCAAAGGCCCATTTCGACAAGGTCCTTCAAGAGA 81484
Query 204182 TGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTG 204241
| || |||| ||||| || ||||||| || || | || | | | | || ||||
Sbjct 81483 TAAGGATTGACAATCTGGAACTCTCCGGCGAGAACACGGCGCGAGTAGAAATTTGAGGTG 81424
Query 204242 AATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGA 204301
|||| ||||| || |||| ||| |||||||||| ||| || || ||||| |||
Sbjct 81423 TATGGCTCGAAGCATTCATTGTAGCCCAAAATCTGAGAGGTCGACGCGGTAGGCATCGGA 81364
Query 204302 GC 204303
||
Sbjct 81363 GC 81362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795152267865200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |