Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq274 147 2e-30 seq212 143 3e-29 seq295 132 5e-26 >seq274 Length=107525 Score = 147 bits (162), Expect = 2e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| || | ||| |||||| || || ||||||||||| || ||||| | Sbjct 41924 ACGGAGCACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCC 41983 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||||||||||||||| |||| ||||||||||| | ||| | || |||||| Sbjct 41984 ATCATCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTT 42043 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 || ||||||| |||| | | | | | ||||| ||||| ||||| || | || || Sbjct 42044 ATCGCTGATCTTGCTCTTCACAGCCTCGATGGTGTCACTCGACTCCACCTCGAGGGTAAT 42103 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || |||||||| ||||||| ||||| ||||| Sbjct 42104 AGTCTTACCCGTCAGGGTTTTAATGAAGATCTGCAT 42139 >seq212 Length=31356 Score = 143 bits (158), Expect = 3e-29 Identities = 147/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| | ||||||||||||||||||||||| Sbjct 28243 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCGTCGAGCTGCTTGCCGGCGAA 28184 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||| | ||| | || |||||||| ||||||| |||| | | Sbjct 28183 GATCAGACGCTGCTGGTCAGGCGGAATGCCTTCCTTGTCGCTGATCTTGCTCTTCACAGC 28124 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||||||| || || || || | ||||| || || ||||| || || || | Sbjct 28123 CTCGATCGTGTCGCTAGACTCGACCTCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTGAT 28064 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 28063 GAAGATCTGCAT 28052 >seq295 Length=432776 Score = 132 bits (146), Expect = 5e-26 Identities = 174/240 (73%), Gaps = 1/240 (0%) Strand=Plus/Plus Query 46364 TTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCG 46423 ||||| || | | ||| | |||| ||||| || |||||||||||| ||||||||| Sbjct 305609 TTGCCGCCACGGAGACGTAGAACCAAATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCG 305668 Query 46424 GATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCC 46483 || ||||| || | ||||| ||||||||||| || || || | ||||| ||||| | Sbjct 305669 GAAAGAGTACGACCATCGTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGG 305728 Query 46484 GGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCC 46543 || | | |||||||| |||||| |||||| | | | | |||||||| || || Sbjct 305729 GGAATTCCTTCCTTGTCAGAGATCTTACTCTTGACAGCCTCAATGGTGTCGCTAGACTCT 305788 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT-TTTGCACAA 46602 || || | ||| ||||| |||||||| | ||| || | || || ||||| ||||| ||| Sbjct 305789 ACTTCTAGCGTAATGGTCTTGCCCGTTAACGTCTTGATGAAAATCTGCATCTTTGCTCAA 305848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565236315683400