Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq285 201 1e-46 seq295 132 5e-26 seq212 129 6e-25 seq274 107 2e-18 >seq285 Length=150650 Score = 201 bits (222), Expect = 1e-46 Identities = 541/824 (66%), Gaps = 19/824 (2%) Strand=Plus/Plus Query 132624 TTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTT 132683 ||||||||| ||||| || ||||| | | || ||| | |||||| || || || || Sbjct 138795 TTTCTCAAAGAAATTGGTCTTTCCAGCAAGAGAGATGTTCTCCATAAAGTCAAACGGATT 138854 Query 132684 GGCTGTGTTGTAGT---GCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAA 132740 || |||||| ||||| ||| | | | | || |||| | |||||| ||||| Sbjct 138855 GGTCACATTGTAGACGCGCTTGTGGCCCA--AAGCCAAC-AGCAAACGGTCGGCGACGAA 138911 Query 132741 CTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTC 132800 ||||| ||||| |||| ||| || | || || |||| || |||| || || Sbjct 138912 CTCGACATATTGGTTCATGAGGTCGGCGTTCATGCCGAGAAGACTTACAGGCAAAGCATC 138971 Query 132801 GGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGC 132860 | || | |||||| ||| |||| || || |||| |||| | |||| || Sbjct 138972 GCGGAAGTATTCTTGCTCAATGTCGACGGCTTCAGTGATGATTCTCTCAACGATAGCACG 139031 Query 132861 GCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTC 132920 ||| || || | | ||| || |||| | | || ||||| ||| |||| ||||| Sbjct 139032 GCTAGGGCGGTTCTGCAAGTGGCTGAATAGGAGACAGGCAAAATCGGTGTGCATACCCTC 139091 Query 132921 GTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAG 132980 || | ||||| ||||||||| |||||| | || |||||||| || || ||||| || Sbjct 139092 ATCGCGCGAAATCAGTTCGTTGGAGAAAGTAAGCCCAGGCATGAGCCCACGCTTTTTCAG 139151 Query 132981 CCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCAC 133040 ||| || || | || || ||| |||||||| || || || || ||||| || | Sbjct 139152 CCAGAAGATTGATGCAAACGAGCCACTGAAGAAGACACCTTCAACAGCAGCGAAGGCAAT 139211 Query 133041 CAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100 |||||||| |||| || | || | | |||||| || || ||||| | ||||| Sbjct 139212 TAGGCGCTCTGCGAAGGTAGACTCAGCGTCGCTGATCCAACGAAGTGCCCACTTAGCCTT 139271 Query 133101 TTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGA 133160 | | | | || || || ||||||||| |||| | | ||||| | Sbjct 139272 CTTGCGAATGGAGGGAATGGTGAAGATGGCGTTGAACAGAAAGTCGGCCTCTTTACTGTC 139331 Query 133161 ACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGAT 133220 |||||| || || || || ||||| | || ||||| | ||| ||||| || Sbjct 139332 TTTCACGTATGTATCAATCAGAAGAGAATAAGTCTCAGAGTGAATGTTTTCCATCATAAT 139391 Query 133221 TTGAAAGCCGTAAAAGCACCGCGCCTCG-----ACCACCTGCACTTCTTGAGCGAAACGC 133275 || |||||||| || || |||||| |||| | ||| || ||| ||| Sbjct 139392 CTGGAAGCCGTAGAAACATTTGGCCTCGGGAATACCAACCTCACCACT-----GAATCGC 139446 Query 133276 TCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTG 133335 || || ||||| || ||||| ||||| || || || || || || || || || | Sbjct 139447 TCAACGAGATTCTCATTGACAATGCCATCACTAGCAGCAAAGAAAGCAAGAACACGGGAC 139506 Query 133336 ATGAAATGGCGCTCGTTGTCGTTCAA---GCGCTCCCAGTCGCGCGTGTCCTTGGACAGG 133392 | || | | ||||| ||||||| | ||||||||||| | |||||||| ||| Sbjct 139507 ACAAAGTATCTCTCGTCATCGTTCAGCTTGTGCTCCCAGTCGTGAGTGTCCTTACCTAGG 139566 Query 133393 TCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTA 133436 || | |||||| | |||||||| |||||||||||||| ||||| Sbjct 139567 TCAATTTCCTCGGCCGTCCAAAATGACGCCTCGGCTTTCTTGTA 139610 >seq295 Length=432776 Score = 132 bits (146), Expect = 5e-26 Identities = 172/234 (74%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||||| || ||| | || ||| | |||||||| ||||| || | || || ||| | Sbjct 305842 AAAGATGCAGATTTTCATCAAGACGTTAACGGGCAAGACCATTACGCTAGAAGTAGAGTC 305783 Query 38300 CACCGACAGCGTGCAAACGCT-TAAAGAAAAAATCCTC-GACAAAGAGGGAATTCCCGCC 38357 | ||||| | | | ||| | |||| || ||| ||||| || ||||||||| | Sbjct 305782 TAGCGACACCATTGAG--GCTGTCAAGAGTAAGATCTCTGACAAGGAAGGAATTCCCCCT 305725 Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417 ||||||||||| ||||| | || ||||| ||||| ||||| | || || || |||| Sbjct 305724 GACCAACAGCGTCTCATCTTTGCTGGCAAGCAGCTTGACGATGGTCGTACTCTTTCCGAC 305665 Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||||||||||||| | || ||||||||||| || ||| | | |||||| Sbjct 305664 TACAACATCCAAAAGGAGTCCACTCTGCATTTGGTTCTACGTCTCCGTGGCGGC 305611 >seq212 Length=31356 Score = 129 bits (142), Expect = 6e-25 Identities = 162/217 (75%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||| | || || |||||||| || || |||||| | || |||||| | | | Sbjct 28052 ATGCAGATCTTCATCAAGACCCTCACGGGGAAGACTATCACCCTTGAGGTCGAGTCTAGC 28111 Query 38304 GACAGCGTGCAAACGCT-TAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| || | | ||| | |||| || ||| |||||| || || ||||| | |||| Sbjct 28112 GACA-CGATCGAG-GCTGTGAAGAGCAAGATCAGCGACAAGGAAGGCATTCCGCCTGACC 28169 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | ||| ||||| ||||| ||||| | ||||||||| ||||||| Sbjct 28170 AGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGACGATGGCCGCACCCTCTCTGACTACA 28229 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||| ||||| | ||||| || |||||||| || Sbjct 28230 ACATCCAGAAGGAGTCCACGCTCCACTTGGTGCTTCG 28266 >seq274 Length=107525 Score = 107 bits (118), Expect = 2e-18 Identities = 159/219 (73%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||| | ||||| || ||||| || || || ||| |||| || ||| | | Sbjct 42139 ATGCAGATCTTCATTAAAACCCTGACGGGTAAGACTATTACCCTCGAGGTGGAGTCGAGT 42080 Query 38304 GACAGCGTGCAAACGCT-TAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCC-GAC 38360 |||| | | | ||| | |||| || ||| ||| || ||||| || |||||| ||| Sbjct 42079 GACACCATCGAG--GCTGTGAAGAGCAAGATCAGCGATAAGGAGGGCAT-CCCGCCTGAC 42023 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || || | ||| ||||| ||||| || || | |||||||| ||||||| Sbjct 42022 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTTGATGATGGCCGCACCCTTTCCGACTAC 41963 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| || ||||| | || || || |||||||| ||| Sbjct 41962 AACATTCAGAAGGAGTCTACTCTTCACTTGGTGCTCCGT 41924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500170955612800