Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq285 201 1e-46
seq295 132 5e-26
seq212 129 6e-25
seq274 107 2e-18
>seq285
Length=150650
Score = 201 bits (222), Expect = 1e-46
Identities = 541/824 (66%), Gaps = 19/824 (2%)
Strand=Plus/Plus
Query 132624 TTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTT 132683
||||||||| ||||| || ||||| | | || ||| | |||||| || || || ||
Sbjct 138795 TTTCTCAAAGAAATTGGTCTTTCCAGCAAGAGAGATGTTCTCCATAAAGTCAAACGGATT 138854
Query 132684 GGCTGTGTTGTAGT---GCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAA 132740
|| |||||| ||||| ||| | | | | || |||| | |||||| |||||
Sbjct 138855 GGTCACATTGTAGACGCGCTTGTGGCCCA--AAGCCAAC-AGCAAACGGTCGGCGACGAA 138911
Query 132741 CTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTC 132800
||||| ||||| |||| ||| || | || || |||| || |||| || ||
Sbjct 138912 CTCGACATATTGGTTCATGAGGTCGGCGTTCATGCCGAGAAGACTTACAGGCAAAGCATC 138971
Query 132801 GGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGC 132860
| || | |||||| ||| |||| || || |||| |||| | |||| ||
Sbjct 138972 GCGGAAGTATTCTTGCTCAATGTCGACGGCTTCAGTGATGATTCTCTCAACGATAGCACG 139031
Query 132861 GCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTC 132920
||| || || | | ||| || |||| | | || ||||| ||| |||| |||||
Sbjct 139032 GCTAGGGCGGTTCTGCAAGTGGCTGAATAGGAGACAGGCAAAATCGGTGTGCATACCCTC 139091
Query 132921 GTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAG 132980
|| | ||||| ||||||||| |||||| | || |||||||| || || ||||| ||
Sbjct 139092 ATCGCGCGAAATCAGTTCGTTGGAGAAAGTAAGCCCAGGCATGAGCCCACGCTTTTTCAG 139151
Query 132981 CCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCAC 133040
||| || || | || || ||| |||||||| || || || || ||||| || |
Sbjct 139152 CCAGAAGATTGATGCAAACGAGCCACTGAAGAAGACACCTTCAACAGCAGCGAAGGCAAT 139211
Query 133041 CAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100
|||||||| |||| || | || | | |||||| || || ||||| | |||||
Sbjct 139212 TAGGCGCTCTGCGAAGGTAGACTCAGCGTCGCTGATCCAACGAAGTGCCCACTTAGCCTT 139271
Query 133101 TTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGA 133160
| | | | || || || ||||||||| |||| | | ||||| |
Sbjct 139272 CTTGCGAATGGAGGGAATGGTGAAGATGGCGTTGAACAGAAAGTCGGCCTCTTTACTGTC 139331
Query 133161 ACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGAT 133220
|||||| || || || || ||||| | || ||||| | ||| ||||| ||
Sbjct 139332 TTTCACGTATGTATCAATCAGAAGAGAATAAGTCTCAGAGTGAATGTTTTCCATCATAAT 139391
Query 133221 TTGAAAGCCGTAAAAGCACCGCGCCTCG-----ACCACCTGCACTTCTTGAGCGAAACGC 133275
|| |||||||| || || |||||| |||| | ||| || ||| |||
Sbjct 139392 CTGGAAGCCGTAGAAACATTTGGCCTCGGGAATACCAACCTCACCACT-----GAATCGC 139446
Query 133276 TCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTG 133335
|| || ||||| || ||||| ||||| || || || || || || || || || |
Sbjct 139447 TCAACGAGATTCTCATTGACAATGCCATCACTAGCAGCAAAGAAAGCAAGAACACGGGAC 139506
Query 133336 ATGAAATGGCGCTCGTTGTCGTTCAA---GCGCTCCCAGTCGCGCGTGTCCTTGGACAGG 133392
| || | | ||||| ||||||| | ||||||||||| | |||||||| |||
Sbjct 139507 ACAAAGTATCTCTCGTCATCGTTCAGCTTGTGCTCCCAGTCGTGAGTGTCCTTACCTAGG 139566
Query 133393 TCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTA 133436
|| | |||||| | |||||||| |||||||||||||| |||||
Sbjct 139567 TCAATTTCCTCGGCCGTCCAAAATGACGCCTCGGCTTTCTTGTA 139610
>seq295
Length=432776
Score = 132 bits (146), Expect = 5e-26
Identities = 172/234 (74%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||| ||||| || ||| | || ||| | |||||||| ||||| || | || || ||| |
Sbjct 305842 AAAGATGCAGATTTTCATCAAGACGTTAACGGGCAAGACCATTACGCTAGAAGTAGAGTC 305783
Query 38300 CACCGACAGCGTGCAAACGCT-TAAAGAAAAAATCCTC-GACAAAGAGGGAATTCCCGCC 38357
| ||||| | | | ||| | |||| || ||| ||||| || ||||||||| |
Sbjct 305782 TAGCGACACCATTGAG--GCTGTCAAGAGTAAGATCTCTGACAAGGAAGGAATTCCCCCT 305725
Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417
||||||||||| ||||| | || ||||| ||||| ||||| | || || || ||||
Sbjct 305724 GACCAACAGCGTCTCATCTTTGCTGGCAAGCAGCTTGACGATGGTCGTACTCTTTCCGAC 305665
Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||||||||||||||| | || ||||||||||| || ||| | | ||||||
Sbjct 305664 TACAACATCCAAAAGGAGTCCACTCTGCATTTGGTTCTACGTCTCCGTGGCGGC 305611
>seq212
Length=31356
Score = 129 bits (142), Expect = 6e-25
Identities = 162/217 (75%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||| | || || |||||||| || || |||||| | || |||||| | | |
Sbjct 28052 ATGCAGATCTTCATCAAGACCCTCACGGGGAAGACTATCACCCTTGAGGTCGAGTCTAGC 28111
Query 38304 GACAGCGTGCAAACGCT-TAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| || | | ||| | |||| || ||| |||||| || || ||||| | ||||
Sbjct 28112 GACA-CGATCGAG-GCTGTGAAGAGCAAGATCAGCGACAAGGAAGGCATTCCGCCTGACC 28169
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| || || | ||| ||||| ||||| ||||| | ||||||||| |||||||
Sbjct 28170 AGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGACGATGGCCGCACCCTCTCTGACTACA 28229
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||||| ||||| | ||||| || |||||||| ||
Sbjct 28230 ACATCCAGAAGGAGTCCACGCTCCACTTGGTGCTTCG 28266
>seq274
Length=107525
Score = 107 bits (118), Expect = 2e-18
Identities = 159/219 (73%), Gaps = 6/219 (3%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||| | ||||| || ||||| || || || ||| |||| || ||| | |
Sbjct 42139 ATGCAGATCTTCATTAAAACCCTGACGGGTAAGACTATTACCCTCGAGGTGGAGTCGAGT 42080
Query 38304 GACAGCGTGCAAACGCT-TAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCC-GAC 38360
|||| | | | ||| | |||| || ||| ||| || ||||| || |||||| |||
Sbjct 42079 GACACCATCGAG--GCTGTGAAGAGCAAGATCAGCGATAAGGAGGGCAT-CCCGCCTGAC 42023
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||||| || || | ||| ||||| ||||| || || | |||||||| |||||||
Sbjct 42022 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTTGATGATGGCCGCACCCTTTCCGACTAC 41963
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||| || ||||| | || || || |||||||| |||
Sbjct 41962 AACATTCAGAAGGAGTCTACTCTTCACTTGGTGCTCCGT 41924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500170955612800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |