Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq260 114 1e-19 seq290 98.7 8e-15 >seq260 Length=85802 Score = 114 bits (126), Expect = 1e-19 Identities = 299/454 (66%), Gaps = 4/454 (1%) Strand=Plus/Minus Query 517853 TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCA 517912 ||||| || || ||||||| || | ||||| | ||| || || || || || || || Sbjct 78408 TCAATACCCTCATACAAAGAGTCGATCTCAATAGGAGTCTGGGTAGAGGAGGAGAGGGCG 78349 Query 517913 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCA 517970 || || ||||| || ||||| || || || | || | ||| |||| ||| | | | Sbjct 78348 CGCTTGGCACGCTCGCATGCAGTTCTCAGACGGCGGAGGGCAC--GCTGGTTGCCAGTAA 78291 Query 517971 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAA 518030 || | || || || | |||||| || | | | | || ||||| || || | Sbjct 78290 TGTCCTTCTTGTACTTGCGCTTGAACTCCTGGGCGAAGTGGTTGACCAGACGGTTGTCGA 78231 Query 518031 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 518090 |||| ||||| ||||| | ||| | || | || | | || | ||| | ||||| | Sbjct 78230 AATCCTCACCACCCAAGTGAGTGTCACCAGCGGTGGACTTGACCTCGAAGATACCATCGT 78171 Query 518091 CAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 518150 ||| ||| | || ||||| ||| |||||||||| || || || || ||||| Sbjct 78170 CAATGCTCAACAAAGAGACATCGAAGGTACCACCACCCAAGTCGAAGATGAGGACATTAT 78111 Query 518151 TTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAA 518210 || || || ||||| || || |||| ||||| ||||| || || || | Sbjct 78110 GCTCACCAGAGCCCTTCTTGTCAAGGCCGTATGCAATGGCAGCCGCAGTGGGCTCGTTGA 78051 Query 518211 TAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTG 518270 |||| | | || || ||||||||||| |||| || || || ||||| || | || | Sbjct 78050 TAATACGAAGGACGTTGAGACCAGCAATGGTTCCGGCGTCCTTGGTGGCCTGACGCTGAG 77991 Query 518271 AATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 | ||||| || || ||||| ||||| || ||||| Sbjct 77990 AGTCGTTGAAGTAGGCAGGGACAGTGATGACGGC 77957 >seq290 Length=200701 Score = 98.7 bits (108), Expect = 8e-15 Identities = 138/193 (72%), Gaps = 7/193 (4%) Strand=Plus/Plus Query 518117 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTT-----AT 518171 || ||||| |||| ||| |||||||| || | | | || | || ||| || | Sbjct 5297 GTACCACCGCCCAAATCGAAAATAAGGACGTACTTCTCCTCCTC--GGTCTTACCAGCAC 5354 Query 518172 CAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGAC 518231 ||||||| || |||| ||||||||| || || || || ||||| | | ||||| || | Sbjct 5355 CAAGACCGTATGCAATAGCAGCAGCGGTAGGCTCGTTGATAATACGAAGGACATTGAGGC 5414 Query 518232 CAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAA 518291 ||||||| || ||||| || ||||| || | ||| || ||||| || || ||||||| Sbjct 5415 CAGCAATGGAGCCAGCATCCTTGGTGGCCTGACGTTGAGAGTCGTTGAAGTAGGCAGGAA 5474 Query 518292 CAGTAATAACGGC 518304 |||| | ||||| Sbjct 5475 CAGTGACGACGGC 5487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780807761128270