Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq277 203 4e-47 >seq277 Length=119773 Score = 203 bits (224), Expect = 4e-47 Identities = 1106/1747 (63%), Gaps = 61/1747 (3%) Strand=Plus/Minus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649 || ||||||||||| ||||||||||| |||| ||| |||| | |||||| | Sbjct 81783 CGCAGATAGTACATACCGGTCTTGAGCCCTTTAGACCAGCCGTAGAAGTGCATACTCGTA 81724 Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAG 105709 |||||| ||| || || || ||| | | |||| ||| ||||| ||||| ||||| Sbjct 81723 AGCTTGCCCATTGTGGGGGATTGCATATAGATGTTCAGACTCTGACTTTGGTCGATGAAA 81664 Query 105710 CGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGATTTCCCACACTGTGCGG 105769 | || | || |||||||| || | |||| |||| ||||| ||||| | Sbjct 81663 GGTCCTCTGCCAGCGGCCATATCGATAATCACCTTTTGACTGATCTCCCAAACTGTCTTG 81604 Query 105770 TAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCTTG 105829 ||||| | |||| ||||| || || | || | | ||| || ||||| | | Sbjct 81603 TAGAGGTCTTTGAGGTCATCAGGAATCGAGGGAATGTCCTTAATCGAGCCCCCAG---AG 81547 Query 105830 ACCATGAGA---TCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACG 105886 | | |||| | |||||| || | | |||||| || || | || || || | | Sbjct 81546 GCAACGAGACGGTTCTTCATGTCGTCGTTCCAAAGGCCCATTTCGACAAGGTCCTTCAAG 81487 Query 105887 AGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTC 105946 |||| ||||||||| |||||||| ||||| | | | |||| || | Sbjct 81486 AGATAAGGATTGACAATCTGGAACTCTCCGGCGAGAACACGGCGCGAGTAGAAATTTGAG 81427 Query 105947 GTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 106006 ||||| || || ||||||||||| | ||||| || || | ||| || || || ||||| Sbjct 81426 GTGTATGGCTCGAAGCATTCATTGTAGCCCAAAATCTGAGAGGTCGACGCGGTAGGCATC 81367 Query 106007 GGTGCCATCAAAAGACTGTTACGAAGACCCT--TTTCCTTGATGCGTTCCTTGAGAACAT 106064 || || | || || |||||||| || | || | ||| || |||| ||| || Sbjct 81366 GGAGCAACTAAGAGCGAATTACGAAGCCCGTACTTAGCCAGATCCG--CCTTCAGAGTAT 81309 Query 106065 CCCAGTCGTAGTTGAGCT---TGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTT 106121 |||| || | |||| ||| | | | |||||| ||| | |||| | || | Sbjct 81308 CCCAATCCCA---AAGCTCGGTGGGATTAACACCCCACAAATCGTAGGAAAGCTCACCCT 81252 Query 106122 GGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGC 106181 ||| | ||| ||||| | | |||||| | ||| | | | |||||| ||| Sbjct 81251 TGGAGGCAGGACTGCCCTCGTAAGACTCATAAGGACCGTCGCGCTGAGCCAACTCAATCG 81192 Query 106182 TCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTT 106241 |||||||| | | |||| || || || |||||||| | | || | |||||| || | Sbjct 81191 ACGCCTCCACAGCTCCGTGGTAGATAGTCTCAAAGATCTGGACGTTGAGCTCCTTCGCCT 81132 Query 106242 CATCTGAATCAAATGCGTAGCGGCA-CAAAATAAATACATCCGCGAGACCTTGAACACCC 106300 | || || || || | | || ||| || | || |||| || |||||||| |||||| Sbjct 81131 CTTCAGAGTCGAAAG-GAAGGCGCAGCATGAAGAAGGCATCAGCAAGACCTTGGACACCC 81073 Query 106301 AAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC---AACGGGATAAAAA 106357 | |||| || | || ||||| |||||| || || ||| ||| || ||| | Sbjct 81072 AGGGCAATGGGGCGATGACGCATGTTAGACAGACG---AGCCTCAGGAACTGGGTAATAG 81016 Query 106358 TTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTT 106417 ||| |||| |||| ||| | || |||| | ||| | ||||| | Sbjct 81015 TTTTTGTCGATGATGTTGTTCAAGTTCCGAGTAATCACCTTGACAACGCTGTGAAGACTC 80956 Query 106418 TCATAATCAAAAGTGCGAGTC--TCTTC------ATTGACATACTTTGGAAGGGCGATTG 106469 | | || ||| || | || ||||| || | | | || ||||| | | Sbjct 80955 TTGAAGTC-AAACTG-TACTCCATCTTCCTGCGTTTTAATAAAAGCAGGGAGGGCTACAG 80898 Query 106470 ATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACA 106529 | || | ||||| ||||| ||||| || || ||||| | |||||| ||||| Sbjct 80897 AGGCAAGGTTGCACACAGCAGTCTCCTCAGGGGATGAATACTCAACAATTTCGCAACACA 80838 Query 106530 AGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCT 106589 | ||||| ||||| || || || | |||||| ||||| ||||| |||| ||||||| Sbjct 80837 AATTGGAGCTCTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCT 80778 Query 106590 TGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CA 106648 ||||||||||| |||| | || ||||| ||||| | || ||||| || | ||| | | Sbjct 80777 TGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAAGCT 80718 Query 106649 TCGGCGGC----TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAG 106704 || | | | |||||| | ||| || ||| || || ||||| ||| || Sbjct 80717 TCTGAGCCTTTATGGTACGACGGC-----CCTTTCCAGCCTTTTCATACTTCTCGTAAAG 80663 Query 106705 GGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAA 106763 || ||||| || || || |||| | || || || || || || || || | || Sbjct 80662 AGCCTCAAATTCATCTCCGTAAACGTCAGCAAGGCCAGG-GCATTCGTTGGGGCACATAA 80604 Query 106764 GAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG--A 106821 | | ||| | | || || | | || ||||||||||| || || |||||||| |||| | Sbjct 80603 GTGTCCAATCAGCATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCA 80544 Query 106822 TGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAA 106881 ||||| ||||| | ||| |||||| | || || || || | || | || Sbjct 80543 TGAAA--AGATCGCGTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATAAA 80486 Query 106882 CTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACG--- 106938 || | | ||| | ||||| ||||| || |||| || | | || |||| Sbjct 80485 GTCGAACACATCGTCATGCCACGGCTCGAGGTAGATGGCAAAGGCACC---AGGACGCTT 80429 Query 106939 ---CCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAAT 106995 |||| |||| | || || || || ||| ||| | || || | ||| |||| ||| Sbjct 80428 GTTCCCACCTTGGTCGACGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAAT 80369 Query 106996 ACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGAT 107055 |||| || || || || || ||| || | | || | | | ||| | Sbjct 80368 CCCATTCGAGGTTCCGTTCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCAC 80309 Query 107056 GTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATA 107115 | |||||| || || || |||| ||||| |||| || | | ||||| | || Sbjct 80308 ACTGAGCCCAATCCCACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTA 80249 Query 107116 GATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT 107175 ||||| | || || || ||||| || | |||||||| | |||||| || | Sbjct 80248 AATACCCTCAATAGAATCGTCCTTCATGTTTACGAGGAAGCACGAGCTCATCTGAGGCTT 80189 Query 107176 TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCT 107234 ||| || || |||||| | | ||| || | ||||| |||| || | | |||||| Sbjct 80188 TGGAGTTCCTGCATTGTACAAGGTGGGCGAGGCGTGGGTGAA-GTATTTGTTGGACATAA 80130 Query 107235 TGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCA 107294 || ||| ||||| | ||| ||||| || || || || || |||| || |||| Sbjct 80129 GGTTGTAAGTCTCTACGACTTTGGGTATGTCATCGCCATGAATACCAATGGAGACGCGCA 80070 Query 107295 TAAACAT 107301 | | ||| Sbjct 80069 TGATCAT 80063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589978624445800