Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq295 127 5e-24
seq212 98.7 2e-15
seq277 93.3 9e-14
>seq295
Length=432776
Score = 127 bits (140), Expect = 5e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|| ||||||||||| ||||| || ||||| |||| |||||| | ||||| || ||||||
Sbjct 305636 TGCAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGACCATCGTCAAGCTGC 305695
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
|| || || ||||| || || |||||||| || ||||| ||||| ||||| || ||
Sbjct 305696 TTGCCAGCAAAGATGAGACGCTGTTGGTCAGGGGGAATTCCTTCCTTGTCAGAGATCTTA 305755
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
|||||| |||||||||||| | || ||||| || |||| ||||| || ||
Sbjct 305756 CTCTTGACAGCCTCAATGGTGTCGCTAGACTCTACTTCTAGCGTAATGGTCTTGCCCGTT 305815
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
|| || || | ||| | |||||
Sbjct 305816 AACGTCTTGATGAAAATCTGCAT 305838
>seq212
Length=31356
Score = 98.7 bits (108), Expect = 2e-15
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || |||||||| || || || ||||| || | || || | ||||| ||||||||
Sbjct 28255 GTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCGTCGAGCTG 28196
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| || || || ||||| || ||||||||||| ||||| || ||
Sbjct 28195 CTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGAATGCCTTCCTTGTCGCTGATCTT 28136
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||| || ||| || ||||| | || || |||||||| | ||||| || ||
Sbjct 28135 GCTCTTCACAGCCTCGATCGTGTCGCTAGACTCGACCTCAAGGGTGATAGTCTTCCCCGT 28076
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| || || | ||| | |||||
Sbjct 28075 GAGGGTCTTGATGAAGATCTGCAT 28052
>seq277
Length=119773
Score = 93.3 bits (102), Expect = 9e-14
Identities = 194/288 (67%), Gaps = 12/288 (4%)
Strand=Plus/Plus
Query 160587 TTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATT 160646
||||| ||| | |||| | ||||||| ||||||||| | || |||| ||| ||||
Sbjct 80538 TTTTCATGGCCCTTTGGATTCCCGATCTGTTCATGAAGCGCGTCAAAGCGGATGCTGATT 80597
Query 160647 GGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCG 160706
||| ||| | || ||||| ||| ||||| |||| ||| ||||| || || || |
Sbjct 80598 GGACACTTATGTGCCCCAACGAATGCCCTGGCCTTGCTGACGTTTACGGAGATGAATTTG 80657
Query 160707 AGACTCTTTATGAAAGATACGAAAAAGAGGGAA-GAGCCAAAAAGGTCGTG-----AAGG 160760
|| ||||||| || | || ||||| | |||| | ||| ||||| ||||
Sbjct 80658 AGGCTCTTTACGAGAAGTATGAAAAGGCTGGAAAGGGCC------GTCGTACCATAAAGG 80711
Query 160761 CCCAAGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCG 160820
| || | || ||| | || |||| || || |||| |||| ||||| ||
Sbjct 80712 CTCAGAAGCTTTGGTACGCTATTCTTGAGGCTCAGACCGAGACTGGTAACCCCTTCATGC 80771
Query 160821 CATACAAGGATGCCATCTGTCGCAAGAGTAACCAGAAGAACTTTGGAA 160868
||||||||||| | |||||||| ||||||||||| ||||||
Sbjct 80772 TCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAATCTTGGAA 80819
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109477406506265
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |