Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq295 127 5e-24 seq212 98.7 2e-15 seq277 93.3 9e-14 >seq295 Length=432776 Score = 127 bits (140), Expect = 5e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || ||||||||||| ||||| || ||||| |||| |||||| | ||||| || |||||| Sbjct 305636 TGCAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGACCATCGTCAAGCTGC 305695 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || || ||||| || || |||||||| || ||||| ||||| ||||| || || Sbjct 305696 TTGCCAGCAAAGATGAGACGCTGTTGGTCAGGGGGAATTCCTTCCTTGTCAGAGATCTTA 305755 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 |||||| |||||||||||| | || ||||| || |||| ||||| || || Sbjct 305756 CTCTTGACAGCCTCAATGGTGTCGCTAGACTCTACTTCTAGCGTAATGGTCTTGCCCGTT 305815 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 || || || | ||| | ||||| Sbjct 305816 AACGTCTTGATGAAAATCTGCAT 305838 >seq212 Length=31356 Score = 98.7 bits (108), Expect = 2e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || |||||||| || || || ||||| || | || || | ||||| |||||||| Sbjct 28255 GTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCGTCGAGCTG 28196 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| || || || ||||| || ||||||||||| ||||| || || Sbjct 28195 CTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGAATGCCTTCCTTGTCGCTGATCTT 28136 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || ||| || ||||| | || || |||||||| | ||||| || || Sbjct 28135 GCTCTTCACAGCCTCGATCGTGTCGCTAGACTCGACCTCAAGGGTGATAGTCTTCCCCGT 28076 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || | ||| | ||||| Sbjct 28075 GAGGGTCTTGATGAAGATCTGCAT 28052 >seq277 Length=119773 Score = 93.3 bits (102), Expect = 9e-14 Identities = 194/288 (67%), Gaps = 12/288 (4%) Strand=Plus/Plus Query 160587 TTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATT 160646 ||||| ||| | |||| | ||||||| ||||||||| | || |||| ||| |||| Sbjct 80538 TTTTCATGGCCCTTTGGATTCCCGATCTGTTCATGAAGCGCGTCAAAGCGGATGCTGATT 80597 Query 160647 GGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCG 160706 ||| ||| | || ||||| ||| ||||| |||| ||| ||||| || || || | Sbjct 80598 GGACACTTATGTGCCCCAACGAATGCCCTGGCCTTGCTGACGTTTACGGAGATGAATTTG 80657 Query 160707 AGACTCTTTATGAAAGATACGAAAAAGAGGGAA-GAGCCAAAAAGGTCGTG-----AAGG 160760 || ||||||| || | || ||||| | |||| | ||| ||||| |||| Sbjct 80658 AGGCTCTTTACGAGAAGTATGAAAAGGCTGGAAAGGGCC------GTCGTACCATAAAGG 80711 Query 160761 CCCAAGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCG 160820 | || | || ||| | || |||| || || |||| |||| ||||| || Sbjct 80712 CTCAGAAGCTTTGGTACGCTATTCTTGAGGCTCAGACCGAGACTGGTAACCCCTTCATGC 80771 Query 160821 CATACAAGGATGCCATCTGTCGCAAGAGTAACCAGAAGAACTTTGGAA 160868 ||||||||||| | |||||||| ||||||||||| |||||| Sbjct 80772 TCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAATCTTGGAA 80819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109477406506265