Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq277 134 2e-26
>seq277
Length=119773
Score = 134 bits (148), Expect = 2e-26
Identities = 521/810 (64%), Gaps = 14/810 (2%)
Strand=Plus/Minus
Query 48000 GCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTC 48059
|| |||||||| ||||| || || | ||||| || |||||| |||| |||| | |
Sbjct 80784 GCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTAC 80725
Query 48060 CAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTA--GTAT 48117
|||| || ||||||||| | | | || | | | ||| || || |||
Sbjct 80724 CAAAGCTTCTGAGCCTTTATGGTACGACGGCCCTTTCCAGCCTTTTCATACTTCTCGTAA 80665
Query 48118 ATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACA 48177
| | | |||||||||||| || || || | | | | ||||| ||||| || || ||||
Sbjct 80664 AGAGC--CTCAAATTCATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTTGGGGCACA 80607
Query 48178 TCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAG 48237
| | || |||||| |||| ||| || | |||| || | ||| || |||||||| |
Sbjct 80606 TAAGTGTCCAATCAGCATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGG 80547
Query 48238 CTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAA 48297
| || || | ||| | | | | ||||| ||||| ||| | || || | ||
Sbjct 80546 CCATGAAAAGATCGCGTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATAA 80487
Query 48298 AGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTAT 48357
|||| | | ||| ||||||| || || | || || || | |||| || || || |
Sbjct 80486 AGTCGAACACATCGTCATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGT 80427
Query 48358 TACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATAC 48417
| || ||||| || | || | ||||| ||||| || || | ||||| || | ||| |
Sbjct 80426 TCCCACCTTGGTCGACGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATCC 80367
Query 48418 CATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTA--CTAAT 48475
|||| || | || || || || | ||||| ||| |||| | || ||| | |
Sbjct 80366 CATTCGAGGTTCCGTTCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCACAC 80307
Query 48476 TGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATA 48535
|| | || || ||||| || || || || || || || | || || ||||| ||
Sbjct 80306 TG--AGCCCAATCCCACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTA 80249
Query 48536 AATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAG-ACATTTGCGGAT 48594
||| || || ||| ||| || |||| |||| || || | || || ||| || || |
Sbjct 80248 AATACCCTCAATAGAATCGTCCTTCATGTTTACGAGGAAGC-ACGAGCTCATCTGAGGCT 80190
Query 48595 GACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACA 48654
|||||||| ||| | || || || || || || | || |||| | || | |
Sbjct 80189 TTGGAGTTCCTGCATTGTACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGACATAA 80130
Query 48655 ATTTATATGTTTCAATAACAGAATCTATATCCCATTG--ATGTATACCTATAGATACACG 48712
|| || || || || | | ||| ||| | ||| ||||| || || || ||
Sbjct 80129 GGTTGTAAGTCTC--TACGACTTTGGGTATGTCATCGCCATGAATACCAATGGAGACGCG 80072
Query 48713 CATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTT 48772
||| | ||||| ||||| | || || ||| ||||| ||||| | || ||
Sbjct 80071 CATGATCATATGCTGAGGGCGCTCGTGAACTTTTCCATTTAGTTTCAGCAAGTAGGAGCG 80012
Query 48773 TTCCAATGTTTTAAAACCAAAATAGTTGTA 48802
|| | ||||| |||||||||||||||||
Sbjct 80011 CTCTAGCGTTTTGAAACCAAAATAGTTGTA 79982
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562106727223800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |