Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq277 187 5e-42 >seq277 Length=119773 Score = 187 bits (206), Expect = 5e-42 Identities = 1002/1582 (63%), Gaps = 67/1582 (4%) Strand=Plus/Minus Query 212582 CTTG-GTGCGTAGATAGTACATGCCGGTCTTTAGGCCCTTGCCCCAGCCGTGCATGTGCA 212640 |||| ||||| ||||||||||| |||||||| || || || |||||||| | ||||| Sbjct 81791 CTTGAGTGCGCAGATAGTACATACCGGTCTTGAGCCCTTTAGACCAGCCGTAGAAGTGCA 81732 Query 212641 TTGCTGTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCAGATGTAGGTTCA 212700 | || || || || | | | || || || || || | ||||| Sbjct 81731 TACTCGTAAGCTT-----GCCCATTGTGGGGG--AT-----TG---CATATAGATGTTCA 81687 Query 212701 GGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATCTCTCT 212760 | |||||| ||||| ||||| || | ||| |||||||||| || || || | | | Sbjct 81686 GACTCTGACTTTGGTCGATGAAAGGTCCTCTGCCAGCGGCCATATCGATAATCACCTTTT 81627 Query 212761 GGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGGGATGT 212820 | || |||||| || |||||| ||| ||||||||||| || || | ||| |||| Sbjct 81626 GACTGATCTCCCAAACTGTCTTGTAGAGGTCTTTGAGGTCATCAGGAATCGAGGGAATGT 81567 Query 212821 TCTGCACAGACCCCCTGTGTATGGTCAGCTGCAGGCG------CATGTCCTCGTTCCAGA 212874 || | || |||| | | || | || || |||||| |||||||| | Sbjct 81566 CCTTAATCGAGCCCCC----AGAGGCAACG--AGACGGTTCTTCATGTCGTCGTTCCAAA 81513 Query 212875 GGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGAGA 212934 ||||| | | ||| ||| | || | ||| ||||| |||||||| || || | || Sbjct 81512 GGCCCATTTCGACAAGGTCCTTCAAGAGATAAGGATTGACAATCTGGAACTCTCCGGCGA 81453 Query 212935 GCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAA 212994 | || | | | ||| || ||||| ||||| ||||||| || || |||| |||| || Sbjct 81452 GAACACGGCGCGAGTAGAAATTTGAGGTGTATGGCTCGAAGCATTCATTGTAGCCCAAAA 81393 Query 212995 TCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCT 213054 |||| | || || || ||||| ||||| || | ||| || | | |||| || Sbjct 81392 TCTGAGAGGTCGACGCGGTAGGCATCGGAGCAACTAAGAGCGAATTACGAAGCCCGTACT 81333 Query 213055 C-GCC-GATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTT 213112 ||| ||| | | | || | | |||| ||||| || || | || Sbjct 81332 TAGCCAGATCCGCCTTCAGAG-TAT-CCCAATCCCAA---------AGCTCGGTGGGATT 81284 Query 213113 CACGTTCCACATGTCAAACTGCAAGATG-CCTTTGCTCACGGGGCTGCCCTGGTAAGAGG 213171 || ||||| || | | ||| | || ||| | || ||||||| |||||| Sbjct 81283 AACACCCCACAAATCGTAG-GAAAGCTCACCCTTGGAGGCAGGACTGCCCTCGTAAGACT 81225 Query 213172 AGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGG 213231 || || || | || |||| ||| ||||||| || || ||| |||||| | Sbjct 81224 CATAAGGACCGTCGCGCTGAGCCAACTCAATCGACGCCTCCACAGCTCCGTGGTAGATAG 81165 Query 213232 TTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCAT---CATCA 213288 | ||||| |||| |||||||| ||| |||||| || ||| || | || || Sbjct 81164 TCTCAAAGATCTGGACGTTGAGCTCCTTCGCCTCTTCAGAGTCGAAAGGAAGGCGCAGCA 81105 Query 213289 TGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGT 213348 || ||| ||||||| || || ||||| || | | | ||||| | || | || || Sbjct 81104 TGAA---GAAGGCATCAGCAAGACCTTGGACACCCAGGGCAATGGGGCGATGACGCATGT 81048 Query 213349 TAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTG 213407 ||||| |||| ||| | |||||| |||| ||||||||| ||||| | ||| Sbjct 81047 TAGACAGACGAGC-CTCAGGAACTGGGTAATAGTTTTTGTCGATGATGTTGTTCAAGTTC 80989 Query 213408 CGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACAC-GTAGCCCC-CGT 213465 || || ||| ||| || | || |||| ||| | || ||| || | | Sbjct 80988 CGAGTAATCACCTTGACAACGCTGTGAAG--ACTCTTGAAGTCAAACTGTACTCCATCTT 80931 Query 213466 CCTGC------ACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCT 213519 ||||| | ||| |||| ||||| | ||| |||||||| || || ||||| Sbjct 80930 CCTGCGTTTTAATAAAAGCAGGGAGGGCTACAGAGGCAAGGTTGCACACAGCAGTCTCCT 80871 Query 213520 GAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGT 213579 || | || ||||| | || ||| |||| ||| || |||||| || || | Sbjct 80870 CAGGGGATGAATACTCAACAATTTCGCAACACAAATTGGAGCTCTTGATGGTTCCAAGAT 80811 Query 213580 TCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCT 213639 ||| ||||| ||| |||||||| |||||||||||||||| ||||| || |||| Sbjct 80810 TCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCT 80751 Query 213640 CTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAG 213699 | ||| | | | || || | ||| || | | ||||| | || | | | Sbjct 80750 CGGTCTGAGCCTCAAGAATAGCGTACCAAAGCTTCTGAGCCTTTATGGTACGACGGCCCT 80691 Query 213700 CTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGT 213759 ||| | | | || |||| ||||| || | | ||||| | || | || Sbjct 80690 TTCCAGCCTTT---TCATACTTCTCGTAAAGAGCCTCAAATTCATCTCCGTAAACGTCAG 80634 Query 213760 CCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCT 213819 | || || || || ||| ||||| || |||| || | || || |||| | || Sbjct 80633 CAAGGCCAGGGCATTCGTTGGGGCACATAAGTGTCCAATCAGCATCCGCTTTGACGCGCT 80574 Query 213820 GCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCA 213879 ||||||||| || || | ||| || || |||| || || | | | |||| ||| Sbjct 80573 TCATGAACAGATCGGGAATCCAAAGGGCCATGAAAAGATCGCGTGCGCGAATCTCTTCCT 80514 Query 213880 CTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGT 213939 || ||||||||||| || | |||||| || | || | ||||||||||| | || Sbjct 80513 TGCCGTGATTTTTGCGCAGGTCGATAAAGTCGAACACATCGTCATGCCACGGCTCGAGGT 80454 Query 213940 AGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGT 213996 ||||||||||||| || || | |||| || || ||||| || | || ||| Sbjct 80453 AGATGGCAAAGGCACCAGGACGCTTGTTCCCACCTTGGTCGACGTAACGAGCAGTGTTGT 80394 Query 213997 TGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACG 214056 || | | |||| | ||| | | ||| || || |||||| || || |||||||| | Sbjct 80393 TGTACACACGCAACATGGGAAGAATCCCATTCGAGGTTCCGTTCGTACCAGCTATATATG 80334 Query 214057 AGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCA 214116 |||| | || | | ||| || |||||| || |||||||| |||| ||||| | Sbjct 80333 AGCCAGTAGCGCGGATGTTATGCACACTGAGCCCAATCCCACCGGCAGACTTCGAGATGA 80274 Query 214117 TGGCGCAGCGCCTCACAGTCTC 214138 ||||||| | ||| ||| || Sbjct 80273 GCGCGCAGCTCTTCAGAGTATC 80252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931529364972800