Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq277 221 1e-52 >seq277 Length=119773 Score = 221 bits (244), Expect = 1e-52 Identities = 1120/1757 (64%), Gaps = 61/1757 (3%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| ||| | ||| ||||||| ||| | || || || || || || ||||| || Sbjct 80053 CCCTCAGCATATGATCATGCGCGTCTCCATTGGTATTCATGGCGATGACATACCCAAAGT 80112 Query 75271 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 75329 | | ||||| ||| || |||||| | | || |||| ||||| | || ||| | | Sbjct 80113 CGTAGAGACTTACAACCTTATGTCCAACAAATAC-TTCACCCACGCCTCGCCCACCTTGT 80171 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 |||||| || || |||| || |||||| | |||||||| | || ||||| | Sbjct 80172 ACAATGCAGGAACTCCAAAGCCTCAGATGAGCTCGTGCTTCCTCGTAAACATGAAGGACG 80231 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 | || || | ||||| || | ||||| | | || |||| ||||| |||| || | Sbjct 80232 ATTCTATTGAGGGTATTTACGATACTCTGAAGAGCTGCGCGCTCATCTCGAAGTCTGCCG 80291 Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509 | || |||||| | | ||| | | | || | | || ||| || || | Sbjct 80292 GTGGGATTGGGCTCAGTGTGCATAACATCCGCGCTACTGGCTCATATATAGCTGGTACGA 80351 Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569 | || || |||| ||| |||| ||| | || || | ||| ||| || || || | Sbjct 80352 ACGGAACCTCGAATGGGATTCTTCCCATGTTGCGTGTGTACAACAACACTGCTCGTTACG 80411 Query 75570 TAAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCATGGC 75623 | | |||| ||| |||| | || || | || ||||| | || || |||| Sbjct 80412 TCGACCAAGGTGGGAA---CAAGCGTCCTGGTGCCTTTGCCATCTACCTCGAGCCGTGGC 80468 Query 75624 ATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGT 75683 ||| |||| | | || || | || | || || || || | |||||| ||| Sbjct 80469 ATGACGATGTGTTCGACTTTATCGACCTGCGCAAAAATCACGGCAAGGAAGAGATTCGCG 80528 Query 75684 GTAGAGATCTCTTTTCAT--CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGA 75741 | ||||| |||||| |||| |||||||| || || ||||||||||| || | | Sbjct 80529 CACGCGATCT--TTTCATGGCCCTTTGGATTCCCGATCTGTTCATGAAGCGCGTCAAAGC 80586 Query 75742 GGGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGGTGG 75800 || || | | ||| | ||| | || || || || || || || || | |||| | Sbjct 80587 GGATGCTGATTGGACACTTATGTGCCCCAACGAATGC-CCTGGCCTTGCTGACGTTTACG 80645 Query 75801 GTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTG 75860 | || || ||||| || || ||| ||||||||| ||| || | | | || | | Sbjct 80646 GAGATGAATTTGAGGCTCTTTACGAGAAGTATGAAAAGGCTGGAAAGGGC----CGTC-G 80700 Query 75861 TACCA----GCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAAC 75915 ||||| | | | || | ||||| | |||||||| | | ||||| |||||||| | Sbjct 80701 TACCATAAAGGCTCAGAAGCTTTGGTACGCTATTCTTGAGGCTCAGACCGAGACTGGTAA 80760 Query 75916 ACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAAC 75975 || | ||||| |||||||||||| ||| ||||| ||||| |||||| | ||||| Sbjct 80761 CCCCTTCATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAATCTTGGAAC 80820 Query 75976 AATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035 ||||||||||| ||| | || |||||| | ||||| || || ||||| || Sbjct 80821 CATCAAGAGCTCCAATTTGTGTTGCGAAATTGTTGAGTATTCATCCCCTGAGGAGACTGC 80880 Query 76036 TGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA------ATGAAGA--GACT 76087 ||| ||||| | || || | ||||| || | | | | | ||||| || | Sbjct 80881 TGTGTGCAACCTTGCCTCTGTAGCCCTCCCTGCTTTTATTAAAACGCAGGAAGATGGAGT 80940 Query 76088 CGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAAC 76147 || ||||| | | | ||||| | ||| | |||| || | ||| Sbjct 80941 -ACA-GTTTGACTTCAAGAGTCTTCACAGCGTTGTCAAGGTGATTACTCGGAACTTGAAC 80998 Query 76148 CGAGTCATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGA 76204 |||| |||| ||| | ||| || || |||| || || |||||| ||||| Sbjct 80999 AACATCATCGACAAAAACTATTACCCAGTTCCTGAG---GCTCGTCTGTCTAACATGCGT 81055 Query 76205 CACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTG-TGCCGCTA 76263 || | || |||| ||||||| |||||||| || |||| || | || ||| || Sbjct 81056 CATCGCCCCATTGCCCTGGGTGTCCAAGGTCTTGCTGATGCCTTCTTCATGCTGCGCCTT 81115 Query 76264 CGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCA 76323 | | || || || || || || |||||| | || | | |||||||| || || || || Sbjct 81116 C-CTTTCGACTCTGAAGAGGCGAAGGAGCTCAACGTCCAGATCTTTGAGACTATCTACCA 81174 Query 76324 CGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGA 76383 || | | |||||||| ||| |||||| | | | ||| | |||||| | | || Sbjct 81175 CGGAGCTGTGGAGGCGTCGATTGAGTTGGCTCAGCGCGACGGTCCTTATGAGTCTTACGA 81234 Query 76384 GGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGA---AACCAA 76440 ||| ||| || ||| | || | |||| | ||| |||||| | | | ||| | Sbjct 81235 GGGCAGTCCTGCCTCCAAGGGTGAGCTTTCCTACGATTTGTGGGGTGTTAATCCCACCGA 81294 Query 76441 GCTCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAG--GAGAAGGGTCTTCGTAAC 76498 ||| | || |||||| ||| |||| || ||| | || | || |||||||| Sbjct 81295 GCT---TTGGGATTGGGATACTCTGAAGG--CGGATCTGGCTAAGTACGGGCTTCGTAAT 81349 Query 76499 AGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAA 76558 || || | || || ||||| || || || ||| | || || ||||| | |||||| Sbjct 81350 TCGCTCTTAGTTGCTCCGATGCCTACCGCGTCGACCTCTCAGATTTTGGGCTACAATGAA 81409 Query 76559 TGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTC 76618 ||||| || |||||||| |||| ||||| | | | ||||| || ||||| Sbjct 81410 TGCTTCGAGCCATACACCTCAAATTTCTACTCGCGCCGTGTTCTCGCCGGAGAGTTCCAG 81469 Query 76619 ATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATG 76678 |||||||| | ||| | || ||||| | || || || ||| | | || ||| Sbjct 81470 ATTGTCAATCCTTATCTCTTGAAGGACCTTGTCGAAATGGGCCTTTGGAACGACGACATG 81529 Query 76679 AAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGAT 76738 ||| | | | || | || || || ||| | | || | || || ||||| Sbjct 81530 AAGAACCGTCTCGTTGCCTCTGGGGGCTCGATTAAGGACATTCCCTCGATTCCTGATGAC 81589 Query 76739 ATCAAGAATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATG-TCATTGACATGGC 76797 |||| | |||||| ||||| ||||| ||| || |||| || | || || ||||| Sbjct 81590 CTCAAAGACCTCTACAAGACAGTTTGGGAGATC-AGTCAAAAGGTGATTATCGATATGGC 81648 Query 76798 CGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGA--ATCTATTCATGGAAAGT 76855 ||| | | || | ||||| || |||||||| ||| ||| |||||| ||| || Sbjct 81649 CGCTGGCAGAGGACCTTTCATCGACCAAAGTCAGAGTCTGAACATCTAT--ATGCAATCC 81706 Query 76856 CCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACC 76915 || || ||| |||||| | |||||| | |||| ||| | |||||||| ||| Sbjct 81707 CCCACAATGGGCAAGCTTACGAGTATGCACTTCTACGGCTGGTCTAAAGGGCTCAAGACC 81766 Query 76916 GGAATGTACTATCTCCG 76932 || ||||||||||| || Sbjct 81767 GGTATGTACTATCTGCG 81783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596567400149600