Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq274 120 3e-22
seq212 102 7e-17
>seq274
Length=107525
Score = 120 bits (132), Expect = 3e-22
Identities = 155/214 (72%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 24700 TACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGC 24759
||||||||||||||| |||||||| || || ||||| |||||||| ||||| || || |
Sbjct 42143 TACGATGCAGATCTTCATTAAAACCCTGACGGGTAAGACTATTACCCTCGAGGTGGAGTC 42084
Query 24760 CACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGA 24819
| ||||| | || | || || |||||| || || || || || || || ||
Sbjct 42083 GAGTGACACCATCGAGGCTGTGAAGAGCAAGATCAGCGATAAGGAGGGCATCCCGCCTGA 42024
Query 24820 TCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTA 24879
|| || ||| ||||||| ||||| || ||||| || ||| | | | | || || ||
Sbjct 42023 CCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTTGATGATGGCCGCACCCTTTCCGACTA 41964
Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTG 24913
|||||||| ||||| || || || |||||||||
Sbjct 41963 CAACATTCAGAAGGAGTCTACTCTTCACTTGGTG 41930
>seq212
Length=31356
Score = 102 bits (112), Expect = 7e-17
Identities = 149/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| || || || || || || || ||||| || || || || || | |
Sbjct 28051 GATGCAGATCTTCATCAAGACCCTCACGGGGAAGACTATCACCCTTGAGGTCGAGTCTAG 28110
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || || |||||| ||||| ||||| || || || || ||
Sbjct 28111 CGACACGATCGAGGCTGTGAAGAGCAAGATCAGCGACAAGGAAGGCATTCCGCCTGACCA 28170
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||| ||||||| ||||| || ||||| || ||| | | | | || || || ||
Sbjct 28171 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGACGATGGCCGCACCCTCTCTGACTACAA 28230
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913
||| || ||||| || || || |||||||||
Sbjct 28231 CATCCAGAAGGAGTCCACGCTCCACTTGGTG 28261
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449895941002600
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |