Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq212 149 4e-31
seq274 131 1e-25
>seq212
Length=31356
Score = 149 bits (164), Expect = 4e-31
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | ||| ||||||||| ||||| ||||| || ||| |||| |||||
Sbjct 28263 AGCACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCG 28204
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| |||||||||||||| || |||||||| |||| | || |||||||||
Sbjct 28203 TCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGAATGCCTTCCTTGTCG 28144
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || || | | |||| || | | |||||| |||| ||| || |||
Sbjct 28143 CTGATCTTGCTCTTCACAGCCTCGATCGTGTCGCTAGACTCGACCTCAAGGGTGATAGTC 28084
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| |||||||||||||| | |||||||||||
Sbjct 28083 TTCCCCGTGAGGGTCTTGATGAAGATCTGCAT 28052
>seq274
Length=107525
Score = 131 bits (144), Expect = 1e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||||| || ||||||||||||||| ||||| || ||| |||| ||||
Sbjct 41928 AGCACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCATCA 41987
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| |||||||||||||| || |||||||| |||| | |||||||| |||
Sbjct 41988 TCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTATCG 42047
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || || | | || | ||| | | ||| || || | ||| || |||
Sbjct 42048 CTGATCTTGCTCTTCACAGCCTCGATGGTGTCACTCGACTCCACCTCGAGGGTAATAGTC 42107
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| ||||| ||||| || | |||||||||||
Sbjct 42108 TTACCCGTCAGGGTTTTAATGAAGATCTGCAT 42139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325691629032605
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |