Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq277 197 1e-45
seq212 116 4e-21
seq274 111 2e-19
seq295 105 6e-18
>seq277
Length=119773
Score = 197 bits (218), Expect = 1e-45
Identities = 1174/1857 (63%), Gaps = 75/1857 (4%)
Strand=Plus/Minus
Query 147941 AGCGGGTTGAGTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAGTC 148000
||||| ||||||||||||||||||||| || |||||||| || | ||| |||||
Sbjct 81796 AGCGGCTTGAGTGCGCAGATAGTACATACCGGTCTTGAGCCCTTTAGACCAGCCGTAGAA 81737
Query 148001 GTGCACCGACGACATGAGCGTGTACGTCGGGTGCG---GCACAAACAGATTAAACGACTG 148057
||||| || | ||| || | | | | | | ||| | | | || | |||
Sbjct 81736 GTGCATACTCG---TAAGCTTGCCCATTGTGGGGGATTGCATATAGATGTTCAGACTCTG 81680
Query 148058 GCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTATCTTCAT 148117
|| ||||| ||||| | || | | |||||||||| || || | |||| | ||
Sbjct 81679 ACTTTGGTCGATGAAAGGTCCTCTGCCAGCGGCCATATCGATAATCACCTTTTGACTGAT 81620
Query 148118 CTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCAC 148177
|||||| | |||||||| || |||| | ||| ||||| | ||| || |
Sbjct 81619 CTCCCAAACTGTCTTGTAGAGGTCTTTGAGGTCATCAGGAATCGAGGGAATGTCCTTAAT 81560
Query 148178 CGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGAT 148237
|||||| | |||| | | || ||| ||||| | | ||| | ||||
Sbjct 81559 CGAGCCCCCAGAGGCAACGAGACGGTTCTTCATGTCGTCGTTCCAAAGGCCCATTTCGAC 81500
Query 148238 CAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAG 148297
||||| | | ||||| |||| || | ||| ||||| |||||||| || || |||
Sbjct 81499 AAGGTCCTTCAAGAGATAAGGATTGACAATCTGGAACTCTCCGGCGAGAACACGGCGCGA 81440
Query 148298 ATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGT 148357
|| | || || | || || || | || |||| |||||||||||| | |||||
Sbjct 81439 GTAGAAATTTGAGGTGTATGGCTCGAAGCATTCATTGTAGCCCAAAATCTGAGAGGTCGA 81380
Query 148358 TGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCG 148417
|| || ||||| || || | ||||| || || | ||| || | |
Sbjct 81379 CGCGGTAGGCATCGGAGCAACTAAGAGCGAATTACGAAGCCCGTACTTAGCCAGATCCGC 81320
Query 148418 CTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAG 148477
|||||||| |||| ||||| ||| | || | || ||||| ||||| ||
Sbjct 81319 CTTCAGAGTATCCCAATCCCAAAGCTCGGTGGGATTAACACCCCACAAATCGTAGGAAAG 81260
Query 148478 AATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGT-GCGCCGCCGCCA 148536
|| | || || ||||||||||| || || || |||| |||| | ||||
Sbjct 81259 CTCACCCTTGGAGGCAGGACTGCCCTCGTAAGACTCATAAGGACCGTCGCGCTGA-GCCA 81201
Query 148537 GTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCA 148596
|| |||||| | || |||| ||| || ||||| || || |||||||
Sbjct 81200 ACTCAATCGACGCCTCCACAGCTCCGTGGTAGATAGTCTCAAAGATCTGGACGTTGAGCT 81141
Query 148597 GCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCT 148656
| |||| || ||| | || | |||||| | || || || ||||| || |
Sbjct 81140 CCTTCGCCTCTTCAGAGTCGAAAGGAAGGCGCAGCATGAAGAAGGCATCAGCAAGACCTT 81081
Query 148657 GTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC-GGA 148715
| || |||| | ||||||| || || ||||| || || || || ||| || | ||
Sbjct 81080 GGACACCCAGGGCAATGGGGCGATGACGCATGTTAGACAGACGAGC-CTCAGGAACTGGG 81022
Query 148716 TAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTTTGTAATTCTGCG 148774
|| | ||| ||||||||| |||| |||| || || | |||||| || ||| |
Sbjct 81021 TAATAGTTTTTGTCGATGATGTTGTTCAAG-TTCCGAGTAATCACCTTGACAACGCTGTG 80963
Query 148775 CAGC------AATTCAAAATCGTACTTGTCATCTACGATGC------ATCGGTTCACGGC 148822
|| || ||||| | ||||| ||||| | ||| || || ||
Sbjct 80962 AAGACTCTTGAAGTCAAACT-GTACTC--CATCTTCC-TGCGTTTTAATAAAAGCAGGGA 80907
Query 148823 G----ATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCT 148878
| | |||||| || |||||||| || ||||| || |||| ||||| || || |
Sbjct 80906 GGGCTACAGAGGCAAGGTTGCACACAGCAGTCTCCTCAGGGGATGAATACTCAACAATTT 80847
Query 148879 CGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGC 148938
|| |||| |||| || ||||| || | ||||| || |||||||||| ||||
Sbjct 80846 CGCAACACAAATTGGAGCTCTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGG 80787
Query 148939 ACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GA 148995
|| |||||||| |||||| | || ||||| || ||| | || | || |
Sbjct 80786 CAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGT 80727
Query 148996 ACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCT------CCTGCTCGT 149049
||| | || | ||| || ||| || | | || |||| ||| || |
Sbjct 80726 ACCAAAGC---TTCTGAGC-----CTTTATGGTACGA-CGGCCCTTTCCAGCCTTTTCAT 80676
Query 149050 A--TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTT 149107
| | ||| | |||| || || | || ||||| || | || || ||||| |
Sbjct 80675 ACTTCTCGTAAAGAGCC--TCAAATTCATCTCCGTAAACGTCAGCAAGGCCAGGGCATTC 80618
Query 149108 GTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGG 149167
|| |||||||| || | ||| | | ||||| | ||||||||||| |||||||||||
Sbjct 80617 GTTGGGGCACATAAGTGTCCAATCAGCATCCGCTTTGACGCGCTTCATGAACAGATCGGG 80558
Query 149168 CACCCAGAGCGCGTACATGA---GGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCG 149224
| ||| || || ||||| | ||||| || ||||| ||| ||
Sbjct 80557 AATCCAAAGGGC---CATGAAAAGATCGCGTGCGCGAATCTCTTCCTTGCCGTGATTTTT 80501
Query 149225 GCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGC 149284
|||||||| || | | ||| | || | ||||||||||| | ||| | || | ||
Sbjct 80500 GCGCAGGTCGATAAAGTCGAACACATCGTCATGCCACGGCTCGAGGTAGATGGCAAAGGC 80441
Query 149285 GCCCTTGCGCTTG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAAC 149341
|| |||||| || || |||||||||| || | ||||||| |||| || |
Sbjct 80440 ACCAGGACGCTTGTTCCCACCTTGGTCGACGTAACGAGCAGTGTTGTTGTACACACGCAA 80381
Query 149342 CATAGGTTCAATGCCACTGGCAGTGCCGTTAGTAG-AGCTA-ATGCGACTGCCGCGCGCT 149399
||| || ||| ||| | | || ||||| ||| ||||| || || ||| ||
Sbjct 80380 CATGGGAAGAATCCCATTCGAGGTTCCGTTCGTACCAGCTATATATGA--GCCAGTAGCG 80323
Query 149400 CGCACTTTGTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAG-TC 149458
|| | || ||||| ||| || || || ||| | |||| |||||| ||||||| ||
Sbjct 80322 CGGATGTTATGCACACTGAGCCCAATCCCACCGGCAGACTTCGAGATGAGCGCGCAGCTC 80263
Query 149459 GCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGA 149518
| || || ||| || ||||| || ||| ||||||| | | || ||||||||
Sbjct 80262 TTC-AGAGTATCGTAAATACCCTCAATAGAATCGTCCTTCATGTTTACGAGGAAGCACGA 80204
Query 149519 GCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATA 149578
|| ||| || || | || || || | ||| |||||| |||||| || || ||
Sbjct 80203 GCTCATCTGAGGCTTTGGAGTTCCTGCATTGTACAAGGTGGGCGAGGCGTGGGTGAAGTA 80144
Query 149579 TTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCC 149638
||| | | ||| | | ||| | ||| | || | |||||||||||||| || ||
Sbjct 80143 TTTGTTGGACATAAGGTTGTAAGTCTCTACGACTTTGGGTATGTCATCGCCATGAATACC 80084
Query 149639 TATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCA---ATTTT 149695
|||| ||||||||| | ||||||||| || ||||| ||| |||||| | |||
Sbjct 80083 AATGGAGACGCGCATGATCATATGCTGAGGGCGCTCGTGAACT---TTTCCATTTAGTTT 80027
Query 149696 GAGCAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCG 149752
||||||||| | ||||| || ||| | ||||| || ||||| | ||||| ||
Sbjct 80026 CAGCAAGTAGGAGCGCTCTAGCGTTTTGAAACCAAAATAGTTGTAATTGAAGTCACG 79970
>seq212
Length=31356
Score = 116 bits (128), Expect = 4e-21
Identities = 146/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| || | ||| | | | || ||||||||||||||
Sbjct 28248 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCA-TCGTCGAGCTGCTTGCC 28190
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || ||||||||||| || || ||||||||||||||| ||||||| |||
Sbjct 28189 GGCGAAGATCAGACGCTGCTGGTCAGGCGGAATGCCTTCCTTGTCGCTGATCTTGCTCTT 28130
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| ||| | ||||||| | | ||| || || | ||||| || || || || || ||
Sbjct 28129 CACAGCCTCGATCGTGTCGCTAGACTCGACCTCAAGGGTGATAGTCTTCCCCGTGAGGGT 28070
Query 133643 TTTTACGAAAATCTGCAT 133660
|| | ||| ||||||||
Sbjct 28069 CTTGATGAAGATCTGCAT 28052
>seq274
Length=107525
Score = 111 bits (122), Expect = 2e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||| ||| | ||| | | | || || |||||||||||
Sbjct 41943 GTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCA-TCATCAAGCTGCTTGCC 42001
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || ||||||||||| || |||||||| ||||| ||| ||||||| |||
Sbjct 42002 GGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTATCGCTGATCTTGCTCTT 42061
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| ||| | ||||| | | |||||| |||| ||| | || || || ||||| ||
Sbjct 42062 CACAGCCTCGATGGTGTCACTCGACTCCACCTCGAGGGTAATAGTCTTACCCGTCAGGGT 42121
Query 133643 TTTTACGAAAATCTGCAT 133660
||| | ||| ||||||||
Sbjct 42122 TTTAATGAAGATCTGCAT 42139
>seq295
Length=432776
Score = 105 bits (116), Expect = 6e-18
Identities = 149/207 (72%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | |||||||| || || || ||||| ||| | || ||| | || || ||
Sbjct 305633 AAATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGACCA-TCGTCAAG 305691
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| || | ||||| ||||| ||||| || || || ||||||||||| | |||
Sbjct 305692 CTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGGGGAATTCCTTCCTTGTCAGAGAT 305751
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||||| ||||| |||||| | | ||| || || | || | ||| |||||
Sbjct 305752 CTTACTCTTGACAGCCTCAATGGTGTCGCTAGACTCTACTTCTAGCGTAATGGTCTTGCC 305811
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| | || || | ||||||||||||
Sbjct 305812 CGTTAACGTCTTGATGAAAATCTGCAT 305838
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483419017385800
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