Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq212 104 2e-17
seq274 98.7 7e-16
>seq212
Length=31356
Score = 104 bits (114), Expect = 2e-17
Identities = 164/233 (70%), Gaps = 8/233 (3%)
Strand=Plus/Minus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||| | | || | |||||| || || ||| ||| || || |||||||| || |
Sbjct 28280 CACCACCACGAAGGCGAAGCACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAG 28221
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
|||| ||||| | ||||| | || || ||||| || |||| ||||||||| || |||
Sbjct 28220 AGAGGGTGCGGCCATCGTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCG 28161
Query 33641 GCACACCTTCTTTGTCGGCAATTTT-CTGTTTCAACATAGTCACG---GTGTCGCTTGAT 33696
| | ||||| |||||| || || || || || || | || |||||||| ||
Sbjct 28160 GAATGCCTTCCTTGTCGCTGATCTTGCTCTT----CACAGCCTCGATCGTGTCGCTAGAC 28105
Query 33697 TCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || |||| ||||| || || || || | || || | |||||||||||
Sbjct 28104 TCGACCTCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTGATGAAGATCTGCAT 28052
>seq274
Length=107525
Score = 98.7 bits (108), Expect = 7e-16
Identities = 163/233 (70%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||| | | ||| | |||||| || ||||| ||| || || |||||||| ||||
Sbjct 41911 CACCACCACGGAGACGGAGCACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGG 41970
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| || ||||| | || || | || || ||||| || |||| ||||||||| || |||
Sbjct 41971 AAAGGGTGCGGCCATCATCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCG 42030
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | || || || ||| || || |||| || || | |||||| || || |||
Sbjct 42031 GGATGCCCTCCTTATCGCTGATCTTGCTCTTCA-CAGCCTCGATGGTGTCACTCGACTCC 42089
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752
|| || | || || || ||||| || | ||||| | ||||||||||| ||
Sbjct 42090 ACCTCGAGGGTAATAGTCTTACCCGTCAGGGTTTTAATGAAGATCTGCATCGT 42142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328702818206400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |