Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq274 131 2e-25
seq212 122 8e-23
>seq274
Length=107525
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | |||||| || | ||| |||||| ||||||||||| ||||
Sbjct 41913 CCACCACGGAGACGGAGCACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAA 41972
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||| || | || || |||||||| || || || |||| ||||||||||| | ||
Sbjct 41973 AGGGTGCGGCCATCATCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGG 42032
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| || |||||| || ||||||| ||||| || | | ||||| ||||| ||||||
Sbjct 42033 ATGCCCTCCTTATCGCTGATCTTGCTCTTCACAGCCTCGATGGTGTCACTCGACTCCACC 42092
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | || || || |||||||||| ||||| | || ||||||||
Sbjct 42093 TCGAGGGTAATAGTCTTACCCGTCAGGGTTTTAATGAAGATCTGCAT 42139
>seq212
Length=31356
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | |||||| || | ||| |||||| || |||||||| || |
Sbjct 28278 CCACCACGAAGGCGAAGCACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGAG 28219
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||| || | ||||| |||||||| || || || |||| ||||||||||| | |||
Sbjct 28218 AGGGTGCGGCCATCGTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGA 28159
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| || |||||||| ||||||| ||||| || | | ||||||||| || || |||
Sbjct 28158 ATGCCTTCCTTGTCGCTGATCTTGCTCTTCACAGCCTCGATCGTGTCGCTAGACTCGACC 28099
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | ||||| || || ||||| | || || | || ||||||||
Sbjct 28098 TCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTGATGAAGATCTGCAT 28052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450791937698600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |