Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq274 122 9e-23
seq295 111 2e-19
seq212 100 3e-16
seq285 82.4 8e-11
>seq274
Length=107525
Score = 122 bits (134), Expect = 9e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||| | ||| || || || ||||| ||||||||||||||| |
Sbjct 41913 CCACCACGGAGACGGAGCACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAA 41972
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| ||||| || || |||| ||||||||| || |||||
Sbjct 41973 AGGGTGCGGCCATCATCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGG 42032
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || || || || | ||||| ||| |||||
Sbjct 42033 ATGCCCTCCTTATCGCTGATCTTGCTCTTCACAGCCTCGATGGTGTCACTCGACTCCACC 42092
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| ||||| || ||||| || | ||||||| ||| || |||||
Sbjct 42093 TCGAGGGTAATAGTCTTACCCGTCAGGGTTTTAATGAAGATCTGCAT 42139
>seq295
Length=432776
Score = 111 bits (122), Expect = 2e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570
|| || ||||| |||||||| |||||||||||| || || || ||||| |||||
Sbjct 305636 TGCAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGACCATCGTCAAGCTGC 305695
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
||||| ||||| || | |||||| || || || || || ||||| || || || ||
Sbjct 305696 TTGCCAGCAAAGATGAGACGCTGTTGGTCAGGGGGAATTCCTTCCTTGTCAGAGATCTTA 305755
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
||||| || || | |||||| || || || || || |||||||| || || |||
Sbjct 305756 CTCTTGACAGCCTCAATGGTGTCGCTAGACTCTACTTCTAGCGTAATGGTCTTGCCCGTT 305815
Query 134691 AAAGTTTTAACGAAAATTTGCATTTT 134716
|| || || | |||||| ||||| ||
Sbjct 305816 AACGTCTTGATGAAAATCTGCATCTT 305841
>seq212
Length=31356
Score = 100 bits (110), Expect = 3e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | ||| | ||| |||||||| ||||| || ||||||||||| | |||| |
Sbjct 28269 AGGCGAAGCACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGG 28210
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||||||||||| ||||| || || |||| ||||||||| || ||||| ||||||||
Sbjct 28209 CCATCGTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGAATGCCTTCC 28150
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || || || || | |||||| || || || || || ||
Sbjct 28149 TTGTCGCTGATCTTGCTCTTCACAGCCTCGATCGTGTCGCTAGACTCGACCTCAAGGGTG 28090
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || | || || | ||| || |||||
Sbjct 28089 ATAGTCTTCCCCGTGAGGGTCTTGATGAAGATCTGCAT 28052
>seq285
Length=150650
Score = 82.4 bits (90), Expect = 8e-11
Identities = 83/108 (77%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 21717 GAGACAAGCAAAATTGGTGTGCAATCCCTCGTCGCGCGAAATCAATTCGTTGCTGAACGT 21776
|||||| ||||||| |||||||| ||||| ||||||||||||| ||||||| ||| ||
Sbjct 139062 GAGACAGGCAAAATCGGTGTGCATACCCTCATCGCGCGAAATCAGTTCGTTGGAGAAAGT 139121
Query 21777 GAGACCGGGCATTAAACCTCGATTTTTAATGTAAAAAATTGCCGCAAA 21824
|| || ||||| | || || ||||| | | || |||| |||||
Sbjct 139122 AAGCCCAGGCATGAGCCCACGCTTTTTCAGCCAGAAGATTGATGCAAA 139169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505396536343400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |