Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq277 259 7e-64
>seq277
Length=119773
Score = 259 bits (286), Expect = 7e-64
Identities = 745/1135 (66%), Gaps = 22/1135 (2%)
Strand=Plus/Minus
Query 69349 TTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATA 69408
||||| || || ||||| | ||| || ||||| ||| || |||||||| || ||
Sbjct 80826 TTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCATG 80767
Query 69409 AACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTT 69468
|| || ||||||| || |||||| || | ||||| | ||||| | ||| |||
Sbjct 80766 AAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAAGCTTCTGAGCCTTT 80707
Query 69469 ATT-----ACGGTCTTGTAACGCTTCTCTTTTTCATA-TTGT-GTATATAGCCGTTCGAA 69521
|| |||| | | | || | ||||||| || | ||| | |||| || ||
Sbjct 80706 ATGGTACGACGGCCCTTTCCAGCCT-----TTTCATACTTCTCGTAAAGAGCC--TCAAA 80654
Query 69522 TTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACAC 69581
||||||||| |||| ||| | | ||||| ||||| || || ||||| | || ||| |
Sbjct 80653 TTCATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATAAGTGTCCAATC 80594
Query 69582 ATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATC 69641
| |||| | || || || ||||| || ||||||||||||||||| || || || |||||
Sbjct 80593 AGCATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGAAAAGATC 80534
Query 69642 TCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATC 69701
| | | | | ||||| || || |||||| || |||| ||| || | | |||
Sbjct 80533 GCGTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATAAAGTCGAACACATC 80474
Query 69702 AGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATC 69761
|||||| || || || || || || | | | || || || || || || || || ||
Sbjct 80473 GTCATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTCCCACCTTGGTC 80414
Query 69762 TATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACC 69821
| ||| | |||||||| || || || | || ||| |||| ||| ||||| || | ||
Sbjct 80413 GACGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATCCCATTCGAGGTTCC 80354
Query 69822 ATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCC 69881
|| || |||| ||||| || | ||||| || ||| | | || || || ||
Sbjct 80353 GTTCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCACACTGAGCCCAATCCC 80294
Query 69882 TCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCT 69941
|| || || ||||| || || || | |||| || || || |||||||| ||
Sbjct 80293 ACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTAAATACCCTCAATAGA 80234
Query 69942 ATCATCTATCATGTTAAGAAGAAAACAGCTAG-ACATTTGATGATGTATAGTTCCCGCAT 70000
||| || ||||||| | || || || | || ||| ||| | | | |||||| ||||
Sbjct 80233 ATCGTCCTTCATGTTTACGAGGAAGCA-CGAGCTCATCTGAGGCTTTGGAGTTCCTGCAT 80175
Query 70001 TAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAA 70060
| | || || || || ||||| ||||| |||| | || | || ||||| || || |
Sbjct 80174 TGTACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGACATAAGGTTGTAAGTCTCTA 80115
Query 70061 TAGCTGATTCTATATCCCACTG--ATGAATTCCTATCGCGACACGCATCAACATATGCTG 70118
|| || ||| || | |||||| || || | ||| ||||| | |||||||||
Sbjct 80114 CGACT--TTGGGTATGTCATCGCCATGAATACCAATGGAGACGCGCATGATCATATGCTG 80057
Query 70119 AGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAA 70178
||| || || ||| ||||| ||||| || ||| || || || ||||| ||
Sbjct 80056 AGGGCGCTCGTGAACTTTTCCATTTAGTTTCAGCAAGTAGGAGCGCTCTAGCGTTTTGAA 79997
Query 70179 CCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTT 70238
|||||||||||||| ||||| | || |||| || |||| || || | ||
Sbjct 79996 ACCAAAATAGTTGTAATTGAAGTCACGATCATAAACGATGGCAGAGTTGAGCTCTTCAGC 79937
Query 70239 ATATTTGGTAACTATATC-CATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTT 70297
|| || || | || ||| | | || || || || ||||| | || ||||
Sbjct 79936 ATGCTTCTGGACAACGTCGTATACCTCTTGG-GAAATCATTGGAGAATGCTTGTCATTGC 79878
Query 70298 TAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCT 70357
|||||| |||||| ||| | ||| || || || | || || | ||||||||| | |
Sbjct 79877 GAGGATTCACATAGCGGAAAAGATCCTCAATGACCTGGCTGAACACTTTTTTTGTCTGTT 79818
Query 70358 TGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAG 70417
|||| | ||| || | || |||| || || || ||||||||||| || ||||
Sbjct 79817 TGTGGAGATTAGACACTGCAATTCGTGCAGCAAGCTGGGCATAGTCAGGGTGGACCGTAG 79758
Query 70418 TACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCC 70472
| | || ||| | || ||||| | |||| | ||| || || || || ||
Sbjct 79757 TCATTGACGCAGCTGTCTCGGCAGCCAGGTTATCGAGTTCGATGGTGGTCACGCC 79703
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686906267023800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |