Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq277 259 7e-64 >seq277 Length=119773 Score = 259 bits (286), Expect = 7e-64 Identities = 745/1135 (66%), Gaps = 22/1135 (2%) Strand=Plus/Minus Query 69349 TTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATA 69408 ||||| || || ||||| | ||| || ||||| ||| || |||||||| || || Sbjct 80826 TTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCATG 80767 Query 69409 AACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTT 69468 || || ||||||| || |||||| || | ||||| | ||||| | ||| ||| Sbjct 80766 AAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAAGCTTCTGAGCCTTT 80707 Query 69469 ATT-----ACGGTCTTGTAACGCTTCTCTTTTTCATA-TTGT-GTATATAGCCGTTCGAA 69521 || |||| | | | || | ||||||| || | ||| | |||| || || Sbjct 80706 ATGGTACGACGGCCCTTTCCAGCCT-----TTTCATACTTCTCGTAAAGAGCC--TCAAA 80654 Query 69522 TTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACAC 69581 ||||||||| |||| ||| | | ||||| ||||| || || ||||| | || ||| | Sbjct 80653 TTCATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATAAGTGTCCAATC 80594 Query 69582 ATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATC 69641 | |||| | || || || ||||| || ||||||||||||||||| || || || ||||| Sbjct 80593 AGCATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGAAAAGATC 80534 Query 69642 TCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATC 69701 | | | | | ||||| || || |||||| || |||| ||| || | | ||| Sbjct 80533 GCGTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATAAAGTCGAACACATC 80474 Query 69702 AGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATC 69761 |||||| || || || || || || | | | || || || || || || || || || Sbjct 80473 GTCATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTCCCACCTTGGTC 80414 Query 69762 TATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACC 69821 | ||| | |||||||| || || || | || ||| |||| ||| ||||| || | || Sbjct 80413 GACGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATCCCATTCGAGGTTCC 80354 Query 69822 ATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCC 69881 || || |||| ||||| || | ||||| || ||| | | || || || || Sbjct 80353 GTTCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCACACTGAGCCCAATCCC 80294 Query 69882 TCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCT 69941 || || || ||||| || || || | |||| || || || |||||||| || Sbjct 80293 ACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTAAATACCCTCAATAGA 80234 Query 69942 ATCATCTATCATGTTAAGAAGAAAACAGCTAG-ACATTTGATGATGTATAGTTCCCGCAT 70000 ||| || ||||||| | || || || | || ||| ||| | | | |||||| |||| Sbjct 80233 ATCGTCCTTCATGTTTACGAGGAAGCA-CGAGCTCATCTGAGGCTTTGGAGTTCCTGCAT 80175 Query 70001 TAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAA 70060 | | || || || || ||||| ||||| |||| | || | || ||||| || || | Sbjct 80174 TGTACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGACATAAGGTTGTAAGTCTCTA 80115 Query 70061 TAGCTGATTCTATATCCCACTG--ATGAATTCCTATCGCGACACGCATCAACATATGCTG 70118 || || ||| || | |||||| || || | ||| ||||| | ||||||||| Sbjct 80114 CGACT--TTGGGTATGTCATCGCCATGAATACCAATGGAGACGCGCATGATCATATGCTG 80057 Query 70119 AGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAA 70178 ||| || || ||| ||||| ||||| || ||| || || || ||||| || Sbjct 80056 AGGGCGCTCGTGAACTTTTCCATTTAGTTTCAGCAAGTAGGAGCGCTCTAGCGTTTTGAA 79997 Query 70179 CCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTT 70238 |||||||||||||| ||||| | || |||| || |||| || || | || Sbjct 79996 ACCAAAATAGTTGTAATTGAAGTCACGATCATAAACGATGGCAGAGTTGAGCTCTTCAGC 79937 Query 70239 ATATTTGGTAACTATATC-CATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTT 70297 || || || | || ||| | | || || || || ||||| | || |||| Sbjct 79936 ATGCTTCTGGACAACGTCGTATACCTCTTGG-GAAATCATTGGAGAATGCTTGTCATTGC 79878 Query 70298 TAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCT 70357 |||||| |||||| ||| | ||| || || || | || || | ||||||||| | | Sbjct 79877 GAGGATTCACATAGCGGAAAAGATCCTCAATGACCTGGCTGAACACTTTTTTTGTCTGTT 79818 Query 70358 TGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAG 70417 |||| | ||| || | || |||| || || || ||||||||||| || |||| Sbjct 79817 TGTGGAGATTAGACACTGCAATTCGTGCAGCAAGCTGGGCATAGTCAGGGTGGACCGTAG 79758 Query 70418 TACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCC 70472 | | || ||| | || ||||| | |||| | ||| || || || || || Sbjct 79757 TCATTGACGCAGCTGTCTCGGCAGCCAGGTTATCGAGTTCGATGGTGGTCACGCC 79703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686906267023800