Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq277 215 6e-51
>seq277
Length=119773
Score = 215 bits (238), Expect = 6e-51
Identities = 1146/1806 (63%), Gaps = 51/1806 (3%)
Strand=Plus/Plus
Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280
||| ||| | ||| |||||||||| |||| ||||||||||| || ||||| ||
Sbjct 80053 CCCTCAGCATATGATCATGCGCGTCTCCATTGGTATTCATGGCGATGACATACCCAAAGT 80112
Query 104281 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 104339
| | ||||| ||| || |||||| | | || |||| ||||| | || ||| | |
Sbjct 80113 CGTAGAGACTTACAACCTTATGTCCAACAAATAC-TTCACCCACGCCTCGCCCACCTTGT 80171
Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399
|||||| || || |||| || || ||| | |||||||| | || ||||| |
Sbjct 80172 ACAATGCAGGAACTCCAAAGCCTCAGATGAGCTCGTGCTTCCTCGTAAACATGAAGGACG 80231
Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459
| || || | ||||| || | ||||| | | || |||| ||||| |||| || |
Sbjct 80232 ATTCTATTGAGGGTATTTACGATACTCTGAAGAGCTGCGCGCTCATCTCGAAGTCTGCCG 80291
Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519
| || |||||| | | ||| | | | || | | || ||| || || |
Sbjct 80292 GTGGGATTGGGCTCAGTGTGCATAACATCCGCGCTACTGGCTCATATATAGCTGGTACGA 80351
Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579
| || || |||| ||| |||| ||| | || || | ||| ||| || || || |
Sbjct 80352 ACGGAACCTCGAATGGGATTCTTCCCATGTTGCGTGTGTACAACAACACTGCTCGTTACG 80411
Query 104580 TAAATCAAGCTGGG------CGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633
| | |||| |||| |||| || | | || |||| || ||||| ||||
Sbjct 80412 TCGACCAAGGTGGGAACAAGCGTCCT---GGTGCCTTTGCCATCTACCTCGAGCCGTGGC 80468
Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693
| | ||| | | || || | || |||| || || || | || ||| ||
Sbjct 80469 ATGACGATGTGTTCGACTTTATCGACCTGCGCAAAAATCACGGCAAGGAAGAGATTCGCG 80528
Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753
|||||||| ||| || || |||||||| ||||| ||||||||| | || | | |
Sbjct 80529 CACGCGATCTTTTCATGGCCCTTTGGATTCCCGATCTGTTCATGAAGCGCGTCAAAGCGG 80588
Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812
|| ||||| | || | || || || || || ||||| || | || | ||
Sbjct 80589 ATGCTGATTGGACACTTATGTGCCCCAACGAATGC-CCTGGCCTTGCTGACGTTTACGGA 80647
Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTG 104872
|| || ||||| || |||||| ||||| || |||| | || | || ||
Sbjct 80648 GATGAATTTGAGGCTCTTTACGAGAAGTATGAA----AAGG-CTGGAAAGGGCCGTCGTA 80702
Query 104873 CCA-----GCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 104926
||| ||| | || | | ||| | |||||||| || |||| |||||||||||||
Sbjct 80703 CCATAAAGGCT-CAGAAGCTTTGGTACGCTATTCTTGAGGCTCAGACCGAGACTGGTAAC 80761
Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986
|| | |||||| ||||| || || |||| ||||| || || |||||| | ||
Sbjct 80762 CCCTTCATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAATCTTGGAACC 80821
Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 105046
|||||||| |||||| | ||| ||||| | || | | || | || ||||| |||
Sbjct 80822 ATCAAGAGCTCCAATTTGTGTTGCGAAATTGTTGAGTATTCATCCCCTGAGGAGACTGCT 80881
Query 105047 GTGTGTAACCTCGCATCAATCGCTCTCCC--CAAGTATGTGGATCCAG--AGACAAAG-A 105101
||||| ||||| || || | || ||||| | ||| | ||| ||| || |
Sbjct 80882 GTGTGCAACCTTGCCTCTGTAGCCCTCCCTGCTTTTATTAAAACGCAGGAAGATGGAGTA 80941
Query 105102 CA-TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGA 105160
|| ||||| | | | || ||| ||| || | || ||| | ||||
Sbjct 80942 CAGTTTGACTTCAAGAGTCTTCACAGCGTTGTCAAGGTGATTACTCGGAACTTGAACAAC 81001
Query 105161 GTTATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATGAGACAC 105217
| || || | ||| | |||||| ||| ||| |||||| ||||| ||| | ||
Sbjct 81002 ATCATCGACAAAAACTATTACCCAGTTCCTGAG---GCTCGTCTGTCTAACATGCGTCAT 81058
Query 105218 CGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGT-CGCCACGC 105276
|| || |||| || ||||| || ||||| || |||| ||| ||| | | |||| |
Sbjct 81059 CGCCCCATTGCCCTGGGTGTCCAAGGTCTTGCTGATGCCTTC-TTCATGCTGCGCCTTCC 81117
Query 105277 ATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGC 105336
|| || || || || |||||||| |||| | | || |||||||| || || ||||
Sbjct 81118 TTTCGACTCTGAAGAGGCGAAGGAGCTCAACGTCCAGATCTTTGAGACTATCTACCACGG 81177
Query 105337 CGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGG 105396
||| | |||||| |||||||| || || ||||| ||||| | | |||||
Sbjct 81178 AGCTGTGGAGGCGTCGATTGAGTTGGCTCAGCGCGACGGTCCTTATGAGTCTTACGAGGG 81237
Query 105397 TTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCA---AGC 105452
||| || || |||||| | |||| | ||| |||||| | | | ||| |||
Sbjct 81238 CAGTCCTGCCTC-CAAGGGTGAGCTTTCCTACGATTTGTGGGGTGTTAATCCCACCGAGC 81296
Query 105453 TTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGG--AGAAGGGTCTTCGTAACAG 105510
|| | || ||||| |||| |||| || ||| | || | || ||||||||
Sbjct 81297 TT---TGGGATTGGGATACTCTGAAGG--CGGATCTGGCTAAGTACGGGCTTCGTAATTC 81351
Query 105511 TCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 105570
||| | | ||||| ||||| || || || ||| | || || ||||| | ||||||||
Sbjct 81352 GCTCTTAGTTGCTCCGATGCCTACCGCGTCGACCTCTCAGATTTTGGGCTACAATGAATG 81411
Query 105571 CTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGAT 105630
||| || || ||||| | || |||| | | | ||||| |||||||| |||
Sbjct 81412 CTTCGAGCCATACACCTCAAATTTCTACTCGCGCCGTGTTCTCGCCGGAGAGTTCCAGAT 81471
Query 105631 TGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAA 105690
|||||| ||||| || | ||||| || || || || ||| | | || |||||
Sbjct 81472 TGTCAATCCTTATCTCTTGAAGGACCTTGTCGAAATGGGCCTTTGGAACGACGACATGAA 81531
Query 105691 GGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAAT 105750
| | | | || | || || || ||| | | ||| ||||| |||| |
Sbjct 81532 GAACCGTCTCGTTGCCTCTGGGGGCTCGATTAAGGACATTCCCTCGATTCCTGATGACCT 81591
Query 105751 TAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGC 105810
|| | | ||| ||||||||||| |||| |||| | || || ||||||||
Sbjct 81592 CAAAGACCTCTACAAGACAGTTTGGGAGATCAGTCAAAAGGTGATTATCGATATGGCCGC 81651
Query 105811 AGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAAC 105870
| | || | ||||| || |||||||| ||| |||| ||| ||| || || ||
Sbjct 81652 TGGCAGAGGACCTTTCATCGACCAAAGTCAGAGTCTGAACATCTATATGCAATCCCCCAC 81711
Query 105871 GATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGAT 105930
||| |||||| | ||||||| | ||| | ||| || || ||||| || || ||
Sbjct 81712 AATGGGCAAGCTTACGAGTATGCACTTCTACGGCTGGTCTAAAGGGCTCAAGACCGGTAT 81771
Query 105931 GTATTACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGAACCAGAATG 105990
||| || || || || | || || || ||||| |||| | |||| | ||| |
Sbjct 81772 GTACTATCTGCGCACTCAAGCCGCTTCGGCACCGATTCAATTCACTGTTGACCAAGAGTC 81831
Query 105991 TGTGGC 105996
| ||||
Sbjct 81832 TCTGGC 81837
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583258649225800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |