Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq260 266 1e-65 seq290 194 5e-44 seq295 116 1e-20 seq274 104 7e-17 seq273 89.7 2e-12 >seq260 Length=85802 Score = 266 bits (294), Expect = 1e-65 Identities = 941/1460 (64%), Gaps = 19/1460 (1%) Strand=Plus/Plus Query 349198 CGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCG 349257 |||| | || || || || || ||||| || |||||||| || | |||||||| Sbjct 77548 CGCTGTTGGTATTGACTTGGGAACTACATACTCTTGTGTAGCCCACTTTTCTAATGATCG 77607 Query 349258 TGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTAC 349317 ||| || || || || || || ||||||||| |||| || || || | |||||| || || Sbjct 77608 TGTCGAGATTATCGCTAACGACCAAGGTAACCGAACCACTCCTTCGTTCGTTGCCTTCAC 77667 Query 349318 CGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAA 349377 ||| | |||||| | |||||||| | || || || || ||||| || || | || Sbjct 77668 CGATAGCGAGCGTCTCATTGGTGACGCCGCCAAGAACCAGGCTGCCATGAACCCTCATAA 77727 Query 349378 TACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATC 349437 || || |||||||| ||||| || || || | | | |||| || || Sbjct 77728 CACCGTCTTTGATGCCAAGCGTCTCATCGGCCGCAAACTCAATGACCCCGAGACTCAGAA 77787 Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGA 349497 || | || || || ||||| | |||||| || || | || || | |||| Sbjct 77788 CGACATCAAGCACTTCCCTTTCAAGGTTGTTGACAAGAACA---ACAAGCCTGCTGTTGA 77844 Query 349498 GGTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCC--GAAGAAATTTCATCAATGGT 349554 ||| || | || ||||| || || |||| || | || || ||||| || ||||| Sbjct 77845 GGTCGAGTTCAAGGGTGAGACCAAGG---TTTTCACTCCTGAGGAGATTTCTTCCATGGT 77901 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 | | |||| |||||||| | |||||| | || | |||| || || | || || Sbjct 77902 TCTTCTTAAGATGAAGGAGACTGCTGAGGGCTACCTCGGTGGAAAGGTTGACCAGGCCGT 77961 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 || ||||| || ||||| || || || | |||||| || || || || || || | Sbjct 77962 CATCACTGTCCCTGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAGGACGCCGGAAC 78021 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 |||||| || | || || || | || || || || |||||||| || || |||||||| Sbjct 78022 CATTGCTGGTCTCAACGTCCTTCGTATTATCAACGAGCCCACTGCGGCTGCCATTGCATA 78081 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 || ||||| || | | | || | ||| | || || || || || |||||||| Sbjct 78082 CGGCCTTGACAAGAAGGGCTCTGGTGAGCATAATGTCCTCATCTTCGACTTGGGTGGTGG 78141 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 ||| || ||||| || | | | |||| || || || || || || || | || || Sbjct 78142 TACCTTCGATGTCTCTTTGTTGAGCATTGACGATGGTATCTTCGAGGTCAAGTCCACCGC 78201 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914 |||||| || || | ||||| || ||||| || || ||||| || || || | | Sbjct 78202 TGGTGACACTCACTTGGGTGGTGAGGATTTCGACAACCGTCTGGTCAACCACTTCGCCCA 78261 Query 349915 AGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCC 349973 || || ||||| |||| || | || ||| | || | | || | || || | Sbjct 78262 GGAGTTCAAGCG-CAAGTACAAGAAGGACATTACTGGCAACCAGCGTGCCCTCCGCCGTC 78320 Query 349974 TAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTG 350033 | |||||||| || || ||||| ||||| || | || || ||||||| || |||||| Sbjct 78321 TGAGAACTGCATGCGAGCGTGCCAAGCGCGCCCTCTCCTCCTCTACCCAGACTCCTATTG 78380 Query 350034 AAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTG 350093 | || || ||| | ||| || | || |||| | ||||| || |||||||| || | Sbjct 78381 AGATCGACTCTTTGTATGAGGGTATTGACTTCTACACTTCTATCACTCGTGCTCGATTCG 78440 Query 350094 AAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAG 350153 | || | || |||||||| | | || || |||||| || || || | || | Sbjct 78441 AGGAGATGTGCCAAGATCTTTTCCGCTCTACCATCTCTCCTGTCGAGAAGGTCCTCAAGG 78500 Query 350154 ATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTA 350213 |||| || | ||| | | || | || | || | ||||||||||| || |||| Sbjct 78501 ATGCCAAGGTTGGCAAGTCTGACGTTCACGAGATTGTGCTTGTTGGTGGTTCCACTCGTA 78560 Query 350214 TTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTA--GATC 350271 | || || |||| || | | ||| || || |||||| || | || | | || Sbjct 78561 TCCCCAAGATTCAGAAGCTCGTTAGTGATTTCTTCTCTGGCAAGGAGC--TCAACCGCTC 78618 Query 350272 AATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGG 350331 || || || ||||| || ||||| || ||||||||||||||||| | || | | || Sbjct 78619 TATCAACCCTGATGAGGCCGTTGCCTACGGTGCTGCTGTTCAGGCTGCCATCCTTACCGG 78678 Query 350332 AAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGG 350391 | | | ||| || | | | || || | || || ||||| |||| | ||||| || Sbjct 78679 CGACACGTCTTCCAAGACTCAGGACCTGCTTCTTCTTGATGTTGCTCCTTTGTCGCTCGG 78738 Query 350392 ATTAGAAACTTCTGGTG--AAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCT 350449 | || || |||| | ||| | || ||||| || | || || || | || Sbjct 78739 TATTGAGACCGCTGGCGGTCAGT--TCACCAAGCTTATCCCGCGTAACAGCACCATCCCG 78796 Query 350450 ACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAA 350509 || || ||||| | | || || || || ||||| ||||| | || || || Sbjct 78797 ACCAAGAAGTCTGAGATCTTCTCCACTGCCGCTGATAACCAGCCCGGTGTGTTGATCCAG 78856 Query 350510 GTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTA 350569 || ||||| ||||| ||| | | ||| || || || | || || | || || Sbjct 78857 GTCTTTGAGGGTGAGCGTCCACTGACTCGTGACAACAACATTCTCGGCAAGTTCGAGCTC 78916 Query 350570 AGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGAT 350629 || | || || || || | || |||||||| || ||| |||||||| ||||| Sbjct 78917 AGCGGTATCCCTCCTGCCCCCCGTGGTACCCCTCAGATCGAGGTCACTTTCGATGTTGAT 78976 Query 350630 TCAAATGGTATTTTAAATGT 350649 | |||||||| || || || Sbjct 78977 GCTAATGGTATCTTGAACGT 78996 >seq290 Length=200701 Score = 194 bits (214), Expect = 5e-44 Identities = 739/1133 (65%), Gaps = 39/1133 (3%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||||| || |||||||| |||||||| || || || ||||| | | || | | Sbjct 5892 GCTATCGGTATCGATTTGGGTACTACGTACTCATGCGTTGCCACCTACGAGAACGCT--- 5836 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || || || ||||| || |||||| | || || || | |||||| || || Sbjct 5835 GTTGAGATCATCGCCAATGAGCAGGGTAACCGTGTCACCCCGTCTTTCGTTGCCTTCACT 5776 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCT-AATCCAAAAAA 349377 || | |||||| | || |||||| |||| || || || ||||| ||| || || | ||| Sbjct 5775 GATAAGGAGCGTCTAATCGGTGATGCTGCCAAGAACCAGGCTGC-GCTCAACCCGAGAAA 5717 Query 349378 TACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATC 349437 || ||||| ||||||||||| ||||||||| | |||| ||| | || || Sbjct 5716 CACTGTTTTCGATGCTAAGCGTCTTATTGGTCGTCGTTTCGATGAGACTACTGTCCAGAG 5657 Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGA 349497 ||| | || | || || | || || | | |||| || ||| | ||||| Sbjct 5656 CGATATCAAGAGCTGGCCCTTCAAGGTCATTGACAGAAACGG---CAACCCATTCATTGA 5600 Query 349498 GGTTGAATATAAAGGTG-AACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTT 349556 |||||| || || | ||| || || || | || | || ||||| | |||||| Sbjct 5599 GGTTGAGTACCTTGGAGAAACTAAGAC-TTTCTCTCCTCAGGAGATTTCTGCCATGGTTC 5541 Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTA 349616 | || || |||||||| || || || || | | | | | || | || || Sbjct 5540 TTGTCAAGATGAAGGAGATCGCCGAGGCCAAGCTTGCCCAGAAGGTTGACAAGGCCGTCG 5481 Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676 | ||||| || ||||| || || || | || ||| || || || ||||||||| || Sbjct 5480 TCACTGTTCCTGCCTACTTCAACGACTCTCAACGTCAGGCCACCAAGGATGCTGGCTCCA 5421 Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736 |||| || | ||||| || | || || || || || || ||||| || |||||||| | Sbjct 5420 TTGCTGGCCTCAATGTCCTTCGTATTATCAACGAGCCTACCGCTGCTGCTATTGCATACG 5361 Query 349737 GGCTTGATAAAATGAGT--GACCAAGaa--aaaaaTA--TTCTTATTTTTGATTTAGGTG 349790 | |||| | || || |||| || | | || || | |||||||| ||||| || | Sbjct 5360 GTCTTGGT--GCTG-GTAAGACCGAGGAGGAGAAGTACGTCCTTATTTTCGATTTGGGCG 5304 Query 349791 GTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAA 349850 |||||||||| ||||| || | || | | | | || | || | ||||| |||| Sbjct 5303 GTGGTACTTTCGATGTTTCCTTGCTTTCTATCCAGGGTGGTGTCTTCAATGTTAAGGCAA 5244 Query 349851 CTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA---TAATCGTCTCGTTTCGCATT 349907 |||| |||||||| || | ||||| | ||||| || || | ||||||| || | Sbjct 5243 CTGCCGGTGATACTCACTTGGGTGGCCAGGATTTCGACACCAACCTTCTCGTT---CACT 5187 Query 349908 TTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGC 349967 | | ||||| ||| | || | || || | || || || | || | | Sbjct 5186 TCCAGGAGGAATTCAAGAAGAAGACTGGCGTCGACATCAGCAATGATGCTCGTGCTCTCC 5127 Query 349968 GTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCT 350027 |||| || | ||||| || || ||||| |||||| | | || ||| | |||| || Sbjct 5126 GTCGTCTGCGCACTGCCTGCGAGCGTGCCAAGCGTACTCTCTCTTCTGCATCCCAGACTA 5067 Query 350028 CTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTC-TTTTCATCTATTACACGTGCT 350086 | |||| | ||||| |||||| | || | || ||| ||| | | || || ||| Sbjct 5066 CCGTTGAGGTCGATTCCCTTGCTCAGGGTGAGGACTTCAACGTCAAC-CTGACCCGAGCT 5008 Query 350087 CGGTTTGAAG-AATTATGTATGGATCTTTT-TAGAGCAACAATGGATCCTGTGGAAAAAG 350144 || || || | ||| | | ||||| ||| | || || || ||||| || || | Sbjct 5007 CGATTCGAGGCTCTTAACGA-CAAGCTTTTCAAGAAC-ACTATCGACCCTGTCGAGAAGG 4950 Query 350145 TATTAAAAGATGCAAAAATGTCCAAAAATC--AGATTGATGAAGTAGTTTTAGTTGGTGG 350202 || | || ||||| ||| | || || || ||||||| || || | |||||||| Sbjct 4949 TACTCAAGGATGC--CGGTGTTGAGAAGTCAAAGGTTGATGAGGTCGTCCTTGTTGGTGG 4892 Query 350203 TTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACC 350262 || || ||||| || || ||||| | | || || || || || ||| ||||| | Sbjct 4891 CTCCACTCGTATCCCCAAGGTTCAGCGCCTCCTCTCAGACTTCTTCGGCGGC-AAGAAGC 4833 Query 350263 TTCTAGATCA--ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCA 350313 || ||| | || ||||| ||||| |||||||| | |||||||||||||| Sbjct 4832 -TCGAGAAGAGCATCAATCCCGATGAGGCTGTTGCTCACGGTGCTGCTGTTCA 4781 >seq295 Length=432776 Score = 116 bits (128), Expect = 1e-20 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 || ||||| | | |||||| | ||| ||||| ||||| ||||| || || || || || Sbjct 305612 CCGCCACGGAGACGTAGAACCAAATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAA 305671 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | || || ||||| ||||| || || ||||||||||| ||||| || || ||||| ||| Sbjct 305672 AGAGTACGACCATCGTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGGGGA 305731 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 |||||||| || || || ||| || ||| ||||| | || | || ||| Sbjct 305732 ATTCCTTCCTTGTCAGAGATCTTACTCTTGACAGCCTCAATGGTGTCGCTAGACTCTACT 305791 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || |||| ||||| || |||| || || | ||||||||||| Sbjct 305792 TCTAGCGTAATGGTCTTGCCCGTTAACGTCTTGATGAAAATCTGCAT 305838 >seq274 Length=107525 Score = 104 bits (114), Expect = 7e-17 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || | |||||||||||||| || ||||| || || || || Sbjct 41912 ACCACCACGGAGACGGAGCACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGA 41971 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || ||||| ||||| || || || || ||||| ||||| ||||| ||||| || Sbjct 41972 AAGGGTGCGGCCATCATCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGG 42031 Query 140630 AATTCCTTCTTTATC-CTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTTCA 140687 || || || ||||| |||| | | ||| || ||| || || | ||| | || Sbjct 42032 GATGCCCTCCTTATCGCTGA--TCTTGCTCTTCACAGCCTCGATGGTGTCACTCGACTCC 42089 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || |||| ||||| || || || ||||| | || |||||||| Sbjct 42090 ACCTCGAGGGTAATAGTCTTACCCGTCAGGGTTTTAATGAAGATCTGCAT 42139 >seq273 Length=105101 Score = 89.7 bits (98), Expect = 2e-12 Identities = 100/132 (76%), Gaps = 4/132 (3%) Strand=Plus/Minus Query 377451 TTCAATGCGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAA 377510 ||||| ||| || || ||| | || || || ||| || | || |||||| | ||||| Sbjct 25941 TTCAA-GCGAGGTACTCCAAGGGTTACGTT---TTTTGAGGAGACTCCAGCATAATGGAA 25886 Query 377511 AGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAAC 377570 ||||| ||||| | ||||||| |||||||||||| || || || ||||| || || || Sbjct 25885 CGTATTGAGAGTCATCTGAGTAGCGGGCTCACCAATAGATTGAGCGGCAATGACTCCGAC 25826 Query 377571 CATTTCTCCAGG 377582 |||||| ||||| Sbjct 25825 CATTTCACCAGG 25814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515248672811885