Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq277 253 2e-62 seq285 104 3e-17 >seq277 Length=119773 Score = 253 bits (280), Expect = 2e-62 Identities = 1114/1745 (64%), Gaps = 71/1745 (4%) Strand=Plus/Minus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || |||| ||||||||| || |||||||| || || ||| ||||| | |||||||||| Sbjct 81786 GTGCGCAGATAGTACATACCGGTCTTGAGCCCTTTAGACCAGCCGTAGAAGTGCATACTC 81727 Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACT--GGTCGA 78307 | |||||| ||| | ||| | ||| ||||||| || ||| |||| |||||| Sbjct 81726 GTAAGCTTGCCCATTGTGGGGGATTGCATATAGATGTTCAG--ACTCTGACTTTGGTCGA 81669 Query 78308 TGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGG 78367 || | | || | | | || ||||| ||||| | | |||||| |||||||| | | Sbjct 81668 TGAAAGGTCCTCTGCCAGCGGCCATATCGATAATCACCTTTTGACTGATCTCCCAAACTG 81609 Query 78368 TCCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTAC--------GCTCCC 78419 || ||| | | | || || || || | || | || | ||| | || ||| Sbjct 81608 TCTTGTAGAGGTCTTTGAGGTCATCAGGAAT--CGAGGGAATGTCCTTAATCGAGCCCCC 81551 Query 78420 ACCGGCTCGCACAATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATC 78479 | ||| || | ||||| || | |||||| | || | ||| || Sbjct 81550 AGAGGCA---ACGAGACGGTTCTTCATGTCGTCGTTCCAAAGGCCCATTTCGACAAGGTC 81494 Query 78480 CCGGACCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGAT 78539 | | || | | || | || |||||| ||||| || |||||| ||||| Sbjct 81493 CTTCAAGAGATAAGGATTGACAATCTGGAACTCTCCGGCGAGAACACGGCGCGAGTAGAA 81434 Query 78540 GTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGT 78599 || | ||||| |||||||| || |||| |||| ||||| | |||||| ||||| Sbjct 81433 ATTTGAGGTGTATGGCTCGAAGCATTCATTGTAGCCCAAAATCTGAGAGGTCGACGCGGT 81374 Query 78600 CGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGT--CTTGATCTCGACCTTT 78657 ||||| || || || | || ||||| ||||| || | | | | |||| || |||| Sbjct 81373 AGGCATCGGAGCAACTAAGAGCGAATTACGAAGCCCGTACTTAGCCAGATC-CG-CCTTC 81316 Query 78658 AGGCCGTCCCAA----AATTCATTCGCCGCGATC----CCCCACATGTCCGGTTGAAGGA 78709 || |||||| || | ||| | ||| ||||||| || | ||| | Sbjct 81315 AGAGTATCCCAATCCCAAAGC--TCGGTGGGATTAACACCCCACAAATC-GTAGGAAAGC 81259 Query 78710 T-ACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGT 78768 | ||||| ||| || || |||| | | | ||| |||| || || || || | Sbjct 81258 TCACCCTTGGAGGCAGGACTGCCCTCGTAAGACTCATAAGGACCGTCGCGCTGAGCCAAC 81199 Query 78769 TCGCATGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCG 78828 || ||| | || || ||||||| | || ||| ||||| ||||||||| Sbjct 81198 TCAATCGACGCCTCCACAGCTCCGTGGTAGATAGTCTCAAAGATCTGGACGTTGAGCTCC 81139 Query 78829 CGCGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGG 78888 ||||| |||||| | ||||| ||||| | |||| |||| || || || ||| Sbjct 81138 TTCGCCTCTTCAGAGTCGAAAGGAAGGCGCAGCATGAAGAAGGCATCAGCAAGACCTTGG 81079 Query 78889 ACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAA 78948 || || | || || || || || |||||||| | || ||| | |||||| Sbjct 81078 ACACCCAGGGCAATGGGGCGATGACGCATGTTAGACAGACGAGCCTCAGGAACTGGGTAA 81019 Query 78949 AAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTC-GTACAA 79007 |||| ||||||| | ||||| ||| || || | ||| | || | | || | Sbjct 81018 TAGTTTTTGTCGATGATGTTGTTCAAGTTCCGAGTAATCACCTT-GACAACGCTGTGAAG 80960 Query 79008 TTTGGCGAAATCAAAATG------AT-TTCCT-----TTGATGAAAGTCGGTAGGCACAG 79055 | ||| ||||| || || ||||| || || |||| || ||| | Sbjct 80959 ACTCTTGAAGTCAAACTGTACTCCATCTTCCTGCGTTTTAATAAAAGCAGGGAGGGCTAC 80900 Query 79056 CGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCA 79115 || || ||||||||||| || ||||| || ||| ||| ||| | ||||| || Sbjct 80899 AGAGGCAAGGTTGCACACAGCAGTCTCCTCAGGGGATGAATACTCAACAATTTCGCAACA 80840 Query 79116 CAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTC 79175 |||||| || ||||||||| || | ||||||||||||||||| ||| || || Sbjct 80839 CAAATTGGAGCTCTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATC 80780 Query 79176 CTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGAT 79235 ||||||| |||| | || | || ||||| |||| || |||| ||| ||| | Sbjct 80779 CTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAAG 80720 Query 79236 GTCCCGGGCCCGGACAACCTTCTTGTAC--CGACCCTGTGCGACGT------ACGTCCGG 79287 | | | ||| || | |||| || |||| | | | | || || | Sbjct 80719 CTTCTGAGCCT--------TTATGGTACGACGGCCCTTTCCAGCCTTTTCATACTTCTCG 80668 Query 79288 TACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCAC 79347 || | | | || | || || || || || | ||||| ||||| |||| |||||| Sbjct 80667 TAAAGAGCCTCAAATTCATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTTGGGGCAC 80608 Query 79348 ATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGG 79407 || || ||| || | ||| | || || |||||| || || || ||||| ||| Sbjct 80607 ATAAGTGTCCAATCAGCATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGG 80548 Query 79408 GCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGA 79467 ||| |||| || ||||| || ||||| || | ||| || || ||||| |||| | Sbjct 80547 GCCATGAAAAGATCGCGTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATA 80488 Query 79468 AAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTG 79527 ||||| | | ||| | ||||||||||| || |||||||| || | ||| |||||| Sbjct 80487 AAGTCGAACACATCGTCATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTG 80428 Query 79528 CCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATG 79587 || || |||| |||||| || || ||||||||| | || || | |||||| | || Sbjct 80427 TTCCCACCTTGGTCGACGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATC 80368 Query 79588 CCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTT-CGAGCA 79646 || | | | |||||||| || || || || | || || ||||| | || Sbjct 80367 CCATTCGAGGTTCCGTTCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCACA 80308 Query 79647 GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTA 79706 | || || || || |||| |||| |||||| ||||||| ||| || || ||||| Sbjct 80307 CT-GAGCCCAATCCCACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTA 80249 Query 79707 GATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGC---AGCTCGACATCTGTGG 79763 || ||||| || || ||||||||||| || ||||||| |||| |||||| || Sbjct 80248 AATACCCTCAATAGAATCGTCCTTCATGTTTACGAGGAAGCACGAGCT---CATCTGAGG 80192 Query 79764 GTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCAT 79823 || || || || ||| | | ||| |||| ||||| |||||| | || | | ||| Sbjct 80191 CTTTGGAGTTCCTGCATTGTACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGACAT 80132 Query 79824 CAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCG 79883 || | ||| ||||| ||| || | ||| ||||| || || || | | |||||| Sbjct 80131 AAGGTTGTAAGTCTCTACGACTTTGGGTATGTCATCGCCATGAATACCAATGGAGACGCG 80072 Query 79884 CATGA 79888 ||||| Sbjct 80071 CATGA 80067 Score = 201 bits (222), Expect = 1e-46 Identities = 407/600 (68%), Gaps = 8/600 (1%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 |||||| | | ||||||| ||| | | || || |||||||| ||| | || |||| Sbjct 80054 CCTCAGCATATGATCATGCGCGTCTCCATTGGTATTCATGGCGATGACATACCCAAAGTC 80113 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 ||||| ||| |||| ||| | | || | |||||| ||||| |||| ||| | | | Sbjct 80114 GTAGAGACTTACAACCTTATGTCCAACAAATACTTCACCCACGCCTCGCCCACCTTGTAC 80173 Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCT---GTTTCCTAGTGGCTATGAAGGAT 19279 || || || || || || |||||| |||| | ||||| || |||||||| Sbjct 80174 AATGCAGGAACTCCAAAGCCTCAGATG---AGCTCGTGCTTCCTCGTAAACATGAAGGAC 80230 Query 19280 GACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCC 19339 || |||||||| || ||||| || || ||| ||||||| |||||| |||| || Sbjct 80231 GATTCTATTGAGGGTATTTACGATACTCTGAAGAGCTGCGCGCTCATCTCGAAGTCTGCC 80290 Query 19340 GGGGGTATCGGGATCCACTGCTCG-AATATCCGGTCGAGTGGTACACGAATCAATGGGAC 19398 || || || ||| || | || | || ||||| | | ||| || || ||| || Sbjct 80291 GGTGGGATTGGGCTC-AGTGTGCATAACATCCGCGCTACTGGCTCATATATAGCTGGTAC 80349 Query 19399 GAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTA 19458 ||||||| | | || || | || ||| | || || | ||||||||| || | || Sbjct 80350 GAACGGAACCTCGAATGGGATTCTTCCCATGTTGCGTGTGTACAACAACACTGCTCGTTA 80409 Query 19459 CGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCA 19518 |||| |||| || || ||| || || | || ||||||||||||||||| ||||| Sbjct 80410 CGTCGACCAAGGTGGGAACAAGCGTCCTGGTGCCTTTGCCATCTACCTCGAGCCGTGGCA 80469 Query 19519 CGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTG 19578 | || || | || || |||| |||||| || || || | || ||||| ||| Sbjct 80470 TGACGATGTGTTCGACTTTATCGACCTGCGCAAAAATCACGGCAAGGAAGAGATTCGCGC 80529 Query 19579 TCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGA 19638 ||||| || |||| |||| | |||||||| || || |||||| || || | ||| Sbjct 80530 ACGCGATCTTTTCATGGCCCTTTGGATTCCCGATCTGTTCATGAAGCGCGTCAAAGCGGA 80589 Query 19639 CGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGA 19698 | || ||| || |||||||| |||||||||||||||| | ||||| ||||| || Sbjct 80590 TGCTGATTGGACACTTATGTGCCCCAACGAATGCCCTGGCCTTGCTGACGTTTACGGAGA 80649 >seq285 Length=150650 Score = 104 bits (114), Expect = 3e-17 Identities = 109/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 59973 tttGCACAACGTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTT 60031 || ||| | || || || || || || ||| || ||||| |||||||| ||||||||| Sbjct 139226 TTCGCAGAGCGCCTAATTGCCTTCGC-TGCTGTTGAAGGTGTCTTCTTCAGTGGCTCGTT 139168 Query 60032 CTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGA 60091 | || |||||||| ||||||||||| |||||||| || || | |||||||||||| Sbjct 139167 TGCATCAATCTTCTGGCTGAAAAAGCGTGGGCTCATGCCTGGGCTTACTTTCTCCAACGA 139108 Query 60092 GCTGATTTCCCGGGACGAGGG 60112 |||||||| || || ||||| Sbjct 139107 ACTGATTTCGCGCGATGAGGG 139087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548522777314800