Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq277 190 2e-43 >seq277 Length=119773 Score = 190 bits (210), Expect = 2e-43 Identities = 396/583 (68%), Gaps = 10/583 (2%) Strand=Plus/Plus Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTC 53239 |||||| || | ||||||||||| || | ||||| || || || ||| | || | Sbjct 80054 CCTCAGCATATGATCATGCGCGTCTCCATTGGTATTCATGGCGATGAC-ATACCCAAAGT 80112 Query 53240 CGT-GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTT 53298 ||| ||||| ||| || | ||| | | || ||||| || |||||| |||| ||| ||| Sbjct 80113 CGTAGAGACTTACAACCTTATGTCCAACAAATACTTCACCCACGCCTCGCCCACCTTGTA 80172 Query 53299 CAACGCTGGTACGAATCACCCTCAGATGTCGAGCT---GCTTCCTGGTGGCGATGAAGGA 53355 ||| || || || | ||||||||| |||| ||||||| || |||||||| Sbjct 80173 CAATGCAGGAACTCCAAAGCCTCAGATG---AGCTCGTGCTTCCTCGTAAACATGAAGGA 80229 Query 53356 TGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTC 53415 || || || || || || ||||| || || ||| || || | |||||| |||| | Sbjct 80230 CGATTCTATTGAGGGTATTTACGATACTCTGAAGAGCTGCGCGCTCATCTCGAAGTCTGC 80289 Query 53416 GGGTGGTATCGGTATCCACTGCTCG-AACGTCCGTGCGAACGGCACACCAATCAAGGGGA 53474 ||||| || || || | || | ||| |||| || | ||| || || || | Sbjct 80290 CGGTGGGATTGGGCTC-AGTGTGCATAACATCCGCGCTACTGGCTCATATATAGCTGGTA 80348 Query 53475 CGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGT 53534 ||||||| | | |||| || | || ||| | || || | ||||||||| || || | Sbjct 80349 CGAACGGAACCTCGAATGGGATTCTTCCCATGTTGCGTGTGTACAACAACACTGCTCGTT 80408 Query 53535 ACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGC 53594 ||||| |||| ||||| ||||| || | || |||||||||||||||||||||| Sbjct 80409 ACGTCGACCAAGGTGGGAACAAGCGTCCTGGTGCCTTTGCCATCTACCTCGAGCCGTGGC 80468 Query 53595 ACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCT 53654 | | ||| | | || ||| |||| ||||| ||||| || | |||||||| ||| Sbjct 80469 ATGACGATGTGTTCGACTTTATCGACCTGCGCAAAAATCACGGCAAGGAAGAGATTCGCG 80528 Query 53655 GCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGG 53714 || || || || | || || |||||||| || || |||||| | || | || Sbjct 80529 CACGCGATCTTTTCATGGCCCTTTGGATTCCCGATCTGTTCATGAAGCGCGTCAAAGCGG 80588 Query 53715 ACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCT 53757 | | || ||| || |||||||| ||||| ||||| ||||| Sbjct 80589 ATGCTGATTGGACACTTATGTGCCCCAACGAATGCCCTGGCCT 80631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547213982141000