Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq289 96.9 3e-15 >seq289 Length=181150 Score = 96.9 bits (106), Expect = 3e-15 Identities = 164/238 (69%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 6842 ATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATAC 6901 ||||| | | || |||||| | || | || | |||||| || |||| || |||||| Sbjct 143019 ATCACCTCATTCAACTGGTCAACACCTTCACCTGTATAGTCTGCATCGCAGCCACGATAC 143078 Query 6902 TCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGA 6961 || || ||||| || | ||||||||| || || ||||| ||||||||||||||| | Sbjct 143079 TCTGCACCAAAATGGCGCCACTGGAATCCATAAACCGGTCCCAAGTCGCCCTCCCTGTTA 143138 Query 6962 GATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACC 7021 || || ||| || || || || ||||||| ||| | | |||||||| | | Sbjct 143139 CTTGTGAGCCCACGTTTATCAAGGAAGTCTCTGCTCCCATTTCCATCCCAGATATGTATA 143198 Query 7022 CCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCT 7079 ||| | || | ||| || | | || | ||| | |||||||| |||||||||| Sbjct 143199 TCCCTCGCTGACAACTCTTTCGCATCGGTTGAGCCCTTGACGAACCAAAGCAGCTCCT 143256 Score = 96.9 bits (106), Expect = 3e-15 Identities = 164/238 (69%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 34266 AGGAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGG 34325 |||||||||| |||||||| | ||| | || | | || ||| | || | ||| Sbjct 143256 AGGAGCTGCTTTGGTTCGTCAAGGGCTCAACCGATGCGAAAGAGTTGTCAGCGAGGGATA 143197 Query 34326 TGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTC 34385 | | |||||||| | | ||| ||||||| || || || || ||| || || | Sbjct 143196 TACATATCTGGGATGGAAATGGGAGCAGAGACTTCCTTGATAAACGTGGGCTCACAAGTA 143137 Query 34386 GGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGT 34445 ||||||||||||||| ||||| || || ||||||||| | || ||||| || |||| Sbjct 143136 ACAGGGAGGGCGACTTGGGACCGGTTTATGGATTCCAGTGGCGCCATTTTGGTGCAGAGT 143077 Query 34446 ATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGAT 34503 |||| || |||| || |||||| | || | || | |||||| || | | ||||| Sbjct 143076 ATCGTGGCTGCGATGCAGACTATACAGGTGAAGGTGTTGACCAGTTGAATGAGGTGAT 143019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448260747032400