Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq212 141 2e-28
seq295 129 1e-24
seq274 125 2e-23
>seq212
Length=31356
Score = 141 bits (156), Expect = 2e-28
Identities = 167/225 (74%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | ||| || |||||||| || |||||||| || || | |||||
Sbjct 28273 ACGAAGGCGAAGCACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGT 28214
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| || ||||||||||| |||||||| || || || |||||||| |||| ||
Sbjct 28213 GCGGCCATCGTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGAATGCC 28154
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTC---AGAGCTTTCAACCTC 211069
||||||||| |||||| ||||| ||||| ||||| ||| || |||||
Sbjct 28153 TTCCTTGTCGCTGATCTTGCTCTTCACAGCCTCGATCGTGTCGCTAGA---CTCGACCTC 28097
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| ||||| |||||||| ||||| | || | ||||||
Sbjct 28096 AAGGGTGATAGTCTTCCCCGTGAGGGTCTTGATGAAGATCTGCAT 28052
>seq295
Length=432776
Score = 129 bits (142), Expect = 1e-24
Identities = 166/228 (73%), Gaps = 6/228 (3%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| || | ||| || | || ||||||||||| ||||||||||| || || | ||| ||
Sbjct 305617 ACGGAGACGTAGAACCAAATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGT 305676
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| || ||||||||||| || ||||| || || ||||||||||| |||| |||
Sbjct 305677 ACGACCATCGTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGGGGAATTCC 305736
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTC---AGAGCTTTCAACCTC 211069
||||||||| |||||| || || || |||||||| ||| || || ||
Sbjct 305737 TTCCTTGTCAGAGATCTTACTCTTGACAGCCTCAATGGTGTCGCTAGA---CTCTACTTC 305793
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| || || ||||| ||||| | ||||| | || | |||||| ||
Sbjct 305794 TAGCGTAATGGTCTTGCCCGTTAACGTCTTGATGAAAATCTGCATCTT 305841
>seq274
Length=107525
Score = 125 bits (138), Expect = 2e-23
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||||||||| ||||| || || ||||| || || | |||||| | |||||
Sbjct 41928 AGCACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCATCA 41987
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| || || || |||||||| || | || ||||| ||
Sbjct 41988 TCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTATCG 42047
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||| ||||| |||||||||||| || |||||||| || || |||
Sbjct 42048 CTGATCTTGCTCTTCACAGCCTCGATGGTGTCACTCGACTCCACCTCGAGGGTAATAGTC 42107
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| || || || | || | ||||||
Sbjct 42108 TTACCCGTCAGGGTTTTAATGAAGATCTGCAT 42139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159147618767675
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |