Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq295 102 6e-17 seq212 84.2 1e-11 >seq295 Length=432776 Score = 102 bits (112), Expect = 6e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||| | || || | ||||| || || || || || ||||| || || Sbjct 305841 AAGATGCAGATTTTCATCAAGACGTTAACGGGCAAGACCATTACGCTAGAAGTAGAGTCT 305782 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| |||| | || || || ||||||| ||||| | || || || Sbjct 305781 AGCGACACCATTGAGGCTGTCAAGAGTAAGATCTCTGACAAGGAAGGAATTCCCCCTGAC 305722 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 ||||||||| | || ||||| ||||| || || || || | || ||| | ||| ||| Sbjct 305721 CAACAGCGTCTCATCTTTGCTGGCAAGCAGCTTGACGATGGTCGTACTCTTTCCGACTAC 305662 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 ||||| ||||| |||||||| | ||||| ||| || Sbjct 305661 AACATCCAAAAGGAGTCCACTCTGCATTTGGTTCTA 305626 >seq212 Length=31356 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||| | || ||||||||||| || || ||||| || || || || || | Sbjct 28052 ATGCAGATCTTCATCAAGACCCTCACGGGGAAGACTATCACCCTTGAGGTCGAGTCTAGC 28111 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | | || | || | || ||||| ||||| | ||||| || || Sbjct 28112 GACACGATCGAGGCTGTGAAGAGCAAGATCAGC-GACAAGGAAGGCATTCCGCCTGACCA 28170 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || |||||||| || || || || | ||||| | || ||||| Sbjct 28171 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGACGATGGCCGCACCCTCTCTGACTACAA 28230 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 28231 CATCCAGAAGGAGTCCAC 28248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008384749860