Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq295 147 5e-30
seq212 131 4e-25
seq274 122 2e-22
seq67 122 2e-22
>seq295
Length=432776
Score = 147 bits (162), Expect = 5e-30
Identities = 156/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570
|| |||||||| || ||||||| ||||| |||| | ||| | ||||| || ||||||
Sbjct 305636 TGCAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGACCATCGTCAAGCTGC 305695
Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630
|| ||||| ||||| || || |||||||| || ||||| ||||||||||| ||||||
Sbjct 305696 TTGCCAGCAAAGATGAGACGCTGTTGGTCAGGGGGAATTCCTTCCTTGTCAGAGATCTTA 305755
Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690
||| ||||| || |||||||| | || || |||| ||| || |||||||||||
Sbjct 305756 CTCTTGACAGCCTCAATGGTGTCGCTAGACTCTACTTCTAGCGTAATGGTCTTGCCCGTT 305815
Query 225691 AAAGTTTTTATGAACACTTGCATTTT 225716
|| || || ||||| | ||||| ||
Sbjct 305816 AACGTCTTGATGAAAATCTGCATCTT 305841
>seq212
Length=31356
Score = 131 bits (144), Expect = 4e-25
Identities = 162/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || | |||||| ||||| || || |||| ||||| || | | ||
Sbjct 28273 ACGAAGGCGAAGCACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGT 28214
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| || |||||||| || || || ||||| |||||||| ||
Sbjct 28213 GCGGCCATCGTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGAATGCC 28154
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||||||| |||||| ||||||||| ||||| ||||| | || || || |
Sbjct 28153 TTCCTTGTCGCTGATCTTGCTCTTCACAGCCTCGATCGTGTCGCTAGACTCGACCTCAAG 28094
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| ||||| ||||| | || || ||||| | |||||
Sbjct 28093 GGTGATAGTCTTCCCCGTGAGGGTCTTGATGAAGATCTGCAT 28052
>seq274
Length=107525
Score = 122 bits (134), Expect = 2e-22
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| ||||| || || || || | ||||| |||| | || | |||||
Sbjct 41928 AGCACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCATCA 41987
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || || || ||||| ||||| || || ||||| ||
Sbjct 41988 TCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTATCG 42047
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||| ||||||||| ||||||||||| | ||||| || | || || |||
Sbjct 42048 CTGATCTTGCTCTTCACAGCCTCGATGGTGTCACTCGACTCCACCTCGAGGGTAATAGTC 42107
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| ||||||| ||||| ||||| | |||||
Sbjct 42108 TTACCCGTCAGGGTTTTAATGAAGATCTGCAT 42139
>seq67
Length=2273
Score = 122 bits (134), Expect = 2e-22
Identities = 135/180 (75%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611
||||| |||||||| || ||||| || || || ||||| ||||| |||||| | ||||||
Sbjct 259 CAACTATACAACGTAATCATTACAGCACACGCTTTTGTAATGATCTTCTTTATGGTTATG 318
Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671
|| | |||| |||| || ||||| || | | || ||| | ||||||||||| ||||||
Sbjct 319 CCCGCTATGGTAGGTGGATTCGGTAACTACCTAGTACCTGTTATGATTGGTGCACCTGAT 378
Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731
|||||||| ||| | || || || || || || |||| || || || || |||||
Sbjct 379 ATGGCTTTCCCACGACTAAATAACATTTCATTCTGGCTACTTCCTCCATCACTAATTCTA 438
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192526692604730
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |