Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq277 242 5e-59
seq285 185 1e-41
seq295 87.8 2e-12
>seq277
Length=119773
Score = 242 bits (268), Expect = 5e-59
Identities = 609/914 (67%), Gaps = 20/914 (2%)
Strand=Plus/Minus
Query 77913 GTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGG 77972
||| | |||| |||||||||||||| |||| ||| | | ||||||||||| || |||
Sbjct 80668 GTAAAGAGCC--TCAAATTCATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTTGGGG 80611
Query 77973 CACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCAT 78032
||||| | || ||| ||| |||| | || || || ||||| || ||||| || |||||
Sbjct 80610 CACATAAGTGTCCAATCAGCATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAA 80551
Query 78033 AGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCG 78092
|| || || || ||||| || | | | ||||| || || ||| || || |||
Sbjct 80550 AGGGCCATGAAAAGATCGCGTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCG 80491
Query 78093 AGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGT 78152
| ||| || | | ||| |||||| || || || || || || | | ||||| ||
Sbjct 80490 ATAAAGTCGAACACATCGTCATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGC 80431
Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212
|| || || || || || | || | || ||||| || || || | |||||| |||| |
Sbjct 80430 TTGTTCCCACCTTGGTCGACGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGA 80371
Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272
|| || || || ||||| || || |||| ||||| ||| | ||||| || |||
Sbjct 80370 ATCCCATTCGAGGTTCCGTTCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGC 80311
Query 78273 ATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCG 78332
| | ||| || || || || ||| || || || ||||| | |||| ||||||
Sbjct 80310 ACACTGAGCCCAATCCCACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCG 80251
Query 78333 TAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAG-ACATTTGATG 78391
|| |||||||| ||| || ||| ||||||| | || || || | || ||| ||| |
Sbjct 80250 TAAATACCCTCAATAGAATCGTCCTTCATGTTTACGAGGAAGCA-CGAGCTCATCTGAGG 80192
Query 78392 ATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAG 78451
| |||||||||||| | || || || || || || || || |||| | || |
Sbjct 80191 CTTTGGAGTTCCTGCATTGTACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGACAT 80132
Query 78452 TAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTG--ATGAATTCCTACCGCTACA 78509
|| ||||| || || | || ||||| ||| | |||||| || | | ||
Sbjct 80131 AAGGTTGTAAGTCTCTACGACTTTGGGTATGT--CATCGCCATGAATACCAATGGAGACG 80074
Query 78510 CGCATCAACATATGCTGAGGTCTTTC---AACCGTCTTATTATTTATTTTCAACAAGTAT 78566
||||| | |||||||||||| | || ||| || ||||| ||||| ||||||
Sbjct 80073 CGCATGATCATATGCTGAGGGCGCTCGTGAAC---TTTTCCATTTAGTTTCAGCAAGTAG 80017
Query 78567 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATA 78626
|| || | ||||| ||||||||||||||||| ||||| | || |||| ||
Sbjct 80016 GAGCGCTCTAGCGTTTTGAAACCAAAATAGTTGTAATTGAAGTCACGATCATAAACGATG 79957
Query 78627 ACAGAATTTAGTTTATC--TTTGTATTTGGTAACAATATC-CATGACAGTAGTTGAAATA 78683
|||| || || | || || | ||| |||| || || | | | |||||
Sbjct 79956 GCAGAGTTGAGCTCTTCAGCATGCTTCTGG--ACAACGTCGTATACCTCTTG-GGAAATC 79900
Query 78684 ATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATCA 78743
|| ||||| | |||| |||||| |||||| || | ||| || || || |
Sbjct 79899 ATTGGAGAATGCTTGTCATTGCGAGGATTCACATAGCGGAAAAGATCCTCAATGACCTGG 79840
Query 78744 CTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATA 78803
|| || | ||||||||| | ||||| |||||||| || || |||| |||||| ||
Sbjct 79839 CTGAACACTTTTTTTGTCTGTTTGTGGAGATTAGACACTGCAATTCGTGCAGCAAGCTGG 79780
Query 78804 GCATAATCAGGATG 78817
||||| ||||| ||
Sbjct 79779 GCATAGTCAGGGTG 79766
Score = 105 bits (116), Expect = 9e-18
Identities = 304/465 (65%), Gaps = 11/465 (2%)
Strand=Plus/Minus
Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841
|| || ||||| || | || |||| || || || |||||||||||||| || || ||
Sbjct 81816 GTGAATTGAATCGGTGCCGAAGCGGCTTGAGTGCGCAGATAGTACATACCGGTCTTGAGC 81757
Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTG--GAATAACTAGGATCGGCTA 76899
|| | ||| |||||||| ||||| || || || ||| | | |||| | |
Sbjct 81756 CCTTTAGACCAGCCGTAGAAGTGCATACTCGTAAGCTTGCCCATTGTGGGGGATTG--CA 81699
Query 76900 TATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTA 76959
||| || |||| ||||||||| |||||||||| |||||| |||| ||||| | |
Sbjct 81698 TATAGATGTTCAGACTCTGACTTTGGTCGATGAAAGGTCCTCTGCCAGCGGCCATATCGA 81639
Query 76960 TAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 77019
|||| ||||||| || ||||||| || ||| | | | ||||| ||||| ||||
Sbjct 81638 TAATCACCTTTTGACTGATCTCCCAAACTGTCTTGTAGAGGTCTTTGAGGTCATCAGGAA 81579
Query 77020 -----GGTTTGTATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATC 77074
|| ||| || ||| || || ||| | | | ||||| || || ||
Sbjct 81578 TCGAGGGAATGTCCTT--AATCGAGCCCCCAGAGGCAACGAGACGGTTCTTCATGTCGTC 81521
Query 77075 ATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTC 77134
||||| | | | || | | | | ||||| |||||| || || || || ||
Sbjct 81520 GTTCCAAAGGCCCATTTCGACAAGGTCCTTCAAGAGATAAGGATTGACAATCTGGAACTC 81461
Query 77135 TCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTT 77194
||| | | || | || | ||| | ||| ||| ||||| || | |||||||||
Sbjct 81460 TCCGGCGAGAACACGGCGCGAGTAGAAATTTGAGGTGTATGGCTCGAAGCATTCATTGTA 81401
Query 77195 TCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAA 77239
|||||||| |||| || || || || ||||| || || || ||
Sbjct 81400 GCCCAAAATCTGAGAGGTCGACGCGGTAGGCATCGGAGCAACTAA 81356
>seq285
Length=150650
Score = 185 bits (204), Expect = 1e-41
Identities = 415/621 (67%), Gaps = 12/621 (2%)
Strand=Plus/Plus
Query 48140 ACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 48199
||| |||||||| || | ||| ||||| | ||| | |||||| || || || ||
Sbjct 139065 ACAGGCAAAATCGGTGTGCATACCCTCATCGCGCGAAATCAGTTCGTTGGAGAAAGTAAG 139124
Query 48200 ACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAA 48259
|| ||||| || ||||| ||||| ||||| || |||| || || || ||| |||||
Sbjct 139125 CCCAGGCATGAGCCCACGCTTTTTCAGCCAGAAGATTGATGCAAACGAGCCACTGAAGAA 139184
Query 48260 TATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA-----ACTG-GCTTCGTT 48313
| ||||| || || || || || | || | |||| || | ||| || ||| |
Sbjct 139185 GACACCTTCAACAGCAGCGAAGGCAATTAGGCGCTCTGCGAAGGTAGACTCAGCGTCGCT 139244
Query 48314 GTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGC 48373
| ||||| || ||||||| | ||||||||| | | || || || || ||
Sbjct 139245 G---ATCCAACGAAGTGCCCACTTAGCCTTCTTGCGAATGGAGGGAATGGTGAAGATGGC 139301
Query 48374 ATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATA 48433
|| || ||||||| || || || ||||| ||||| ||||| || | |||| |||
Sbjct 139302 GTTGAACAGAAAGTCGGCCTCTTTACTGTCTTTCACGTATGTATCAATCAGAAGAGAATA 139361
Query 48434 CATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGT 48493
| || |||||||| ||||| || ||||| || ||||| |||||| | || || |
Sbjct 139362 AGTCTCAGAGTGAATGTTTTCCATCATAATCTGGAAGCCGTAGAAACATTTGGCCTCGGG 139421
Query 48494 GATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGC 48553
|| ||||| || ||||| ||| | | ||||||||| || || |||||||||||
Sbjct 139422 AATACCAACCTCACCACTGAATCGCTCAACGAGATTCTCATTGACAATGCCATCACTAGC 139481
Query 48554 AGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTT---ATT 48610
|||||| || || | ||| | | ||| ||| | |||| |||| || |
Sbjct 139482 AGCAAAGAAAGCAAGAACACGGGACACAAAGTATCTCTCGTCATCGTTCAGCTTGTGCTC 139541
Query 48611 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGC 48670
|||||| | | || || || || | ||| || || ||||||||||| ||||| ||
Sbjct 139542 CCAGTCGTGAGTGTCCTTACCTAGGTCAATTTCCTCGGCCGTCCAAAATGACGCCTCGGC 139601
Query 48671 TTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAATCTATTTGG 48730
||| || || | ||| || |||| | ||| ||||| | |||||| | |||||
Sbjct 139602 TTTCTTGTAAGCCTGCCAAATCGAGTTGTACTTGATCGGGAACAAAACAAACCGGTTTGG 139661
Query 48731 ATTTTTTGCAAGGATAGGTTC 48751
||||| |||||| || ||
Sbjct 139662 ATTTTCCTGAAGGATGGGCTC 139682
>seq295
Length=432776
Score = 87.8 bits (96), Expect = 2e-12
Identities = 140/200 (70%), Gaps = 6/200 (3%)
Strand=Plus/Minus
Query 78021 TCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTC 78080
|||||||||||||| ||| |||||| || || | | || || || ||||| |||
Sbjct 224423 TCAGGTATCCATAGCGCATAAAATAGGTCGCGTGCCCGATACTCATCCTTTCCGTGATTT 224364
Query 78081 TTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATA 78140
|| |||||||| | ||| | | |||||| | ||||||||| ||||| | | | ||
Sbjct 224363 TTCTTAAGATCTAAGAACCCAAAAATATCTGCATGCCATGGCTCTAG---TGTCACACTA 224307
Query 78141 A---CTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACT 78197
| | ||||| | ||| || || |||||||| | ||||| | |||||| | |||
Sbjct 224306 ATTGCACCAGGCCTTTTGTTGCCGCCCTGATCAACGAATCTGCAAGCGTTATTGAATACT 224247
Query 78198 CTCAACATTGGAATAATACC 78217
| ||||| |||| ||| ||
Sbjct 224246 CGTAACATGGGAACAATCCC 224227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694666238408800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |