Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq277 241 2e-58 seq285 168 1e-36 seq295 100 4e-16 >seq277 Length=119773 Score = 241 bits (266), Expect = 2e-58 Identities = 705/1070 (66%), Gaps = 16/1070 (1%) Strand=Plus/Minus Query 76351 CTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAAC 76410 |||||| ||||||||||| | ||||||||||| ||| | ||||| || || | Sbjct 80827 CTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCAT 80768 Query 76411 AAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTT 76469 || || | ||||| || |||| | || | ||||| | ||| | | ||| ||| | Sbjct 80767 GAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAA-GCTTCTGAGCCT 80709 Query 76470 TTATTATA-GATTTGTATCGCTTCTCTCTTTCATA-TTGT-GTATATAACCGTTCAAATT 76526 |||| || || | | || ||||||| || | ||| | | || ||||||| Sbjct 80708 TTATGGTACGACGGCCCTTTCCAGCCT-TTTCATACTTCTCGTAAAGAGCC--TCAAATT 80652 Query 76527 CATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCAC 76586 ||||||| |||| ||| | | ||||| ||||| || || ||||| | || ||| ||| Sbjct 80651 CATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATAAGTGTCCAATCAG 80592 Query 76587 CATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTC 76646 |||| | || || || ||||| || ||||| || ||||| || || || || ||||| | Sbjct 80591 CATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGAAAAGATCGC 80532 Query 76647 GGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAG 76706 | | | | ||||| || || ||| || || || | || || | | ||| Sbjct 80531 GTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATAAAGTCGAACACATCGT 80472 Query 76707 AATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTA 76766 |||||| || || || || || || | |||| || || || || || || || || | Sbjct 80471 CATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTCCCACCTTGGTCGA 80412 Query 76767 TATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCAT 76826 || | |||||||| || || || | |||||| |||| ||| || || || || || | Sbjct 80411 CGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATCCCATTCGAGGTTCCGT 80352 Query 76827 TTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTC 76886 | || |||| ||||| ||| || || || ||| | | || || || || | Sbjct 80351 TCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCACACTGAGCCCAATCCCAC 80292 Query 76887 CTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTAT 76946 | || || ||||| || || |||| |||| || || || || ||||| ||| || Sbjct 80291 CGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTAAATACCCTCAATAGAAT 80232 Query 76947 CATCCATCATGTTAAGAAGAAAACAGCTAG-ACATTTGATGATGAACAGTTCCTGCATTA 77005 | ||| ||||||| | || || || | || ||| ||| | | |||||||||||| Sbjct 80231 CGTCCTTCATGTTTACGAGGAAGCA-CGAGCTCATCTGAGGCTTTGGAGTTCCTGCATTG 80173 Query 77006 AACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATA 77065 |||| || || || || || ||||| |||| | || | || ||||| || || | Sbjct 80172 TACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGACATAAGGTTGTAAGTCTCTACG 80113 Query 77066 ACTGCTTCTATATCCCATTG--ATGAATTCCTACAGCGACACGCATCAACATATGCTGAG 77123 ||| || ||| ||| | |||||| || | | ||| ||||| | ||||||||||| Sbjct 80112 ACT--TTGGGTATGTCATCGCCATGAATACCAATGGAGACGCGCATGATCATATGCTGAG 80055 Query 77124 GTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAAC 77183 | || || | || ||||| ||||| |||||| || || | ||||| |||| Sbjct 80054 GGCGCTCGTGAACTTTTCCATTTAGTTTCAGCAAGTAGGAGCGCTCTAGCGTTTTGAAAC 79995 Query 77184 CAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTAT 77243 ||||||||||||| ||||| | || |||| || | || || || | || || Sbjct 79994 CAAAATAGTTGTAATTGAAGTCACGATCATAAACGATGGCAGAGTTGAGCTCTTCAGCAT 79935 Query 77244 ATTTGGTAACAATATC-CATGACAGTGGTAGAAATAATTGGAGATCGTATTCCATTTTTA 77302 || |||| || || | | | ||||| |||||||| | | |||| | Sbjct 79934 GCTTCTGGACAACGTCGTATACCTCTTG-GGAAATCATTGGAGAATGCTTGTCATTGCGA 79876 Query 77303 GGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTG 77362 ||||| |||||| || | || || || || | ||| || | ||||||||| | ||| Sbjct 79875 GGATTCACATAGCGGAAAAGATCCTCAATGACCTGGCTGAACACTTTTTTTGTCTGTTTG 79816 Query 77363 TGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATG 77412 || ||||| || || || |||| ||||| || ||||||||||| || Sbjct 79815 TGGAGATTAGACACTGCAATTCGTGCAGCAAGCTGGGCATAGTCAGGGTG 79766 Score = 107 bits (118), Expect = 3e-18 Identities = 309/469 (66%), Gaps = 10/469 (2%) Strand=Plus/Minus Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431 |||| ||||| ||||| || | || || | || || || |||||||||||||| || | Sbjct 81821 CAACAGTGAATTGAATCGGTGCCGAAGCGGCTTGAGTGCGCAGATAGTACATACCGGTCT 81762 Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTG--GAATAACTCGGATC 75489 | || || | ||| |||||||| ||||| || || || ||| | | |||| Sbjct 81761 TGAGCCCTTTAGACCAGCCGTAGAAGTGCATACTCGTAAGCTTGCCCATTGTGGGGGATT 81702 Query 75490 GGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCAT 75549 | |||| || |||| ||||||||| |||||||||| |||||| |||| ||||| Sbjct 81701 G--CATATAGATGTTCAGACTCTGACTTTGGTCGATGAAAGGTCCTCTGCCAGCGGCCAT 81644 Query 75550 TTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATC 75609 | ||||| ||||||| || ||||||| || ||| | | | ||||| ||||| Sbjct 81643 ATCGATAATCACCTTTTGACTGATCTCCCAAACTGTCTTGTAGAGGTCTTTGAGGTCATC 81584 Query 75610 TGGAA--GATTTGTATTT--TGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCT 75665 |||| || | || | | ||| || || ||| | | | ||||| || | Sbjct 81583 AGGAATCGA-GGGAATGTCCTTAATCGAGCCCCCAGAGGCAACGAGACGGTTCTTCATGT 81525 Query 75666 CATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAA 75725 | || ||||| | | ||| | | | | ||||| |||||| ||||| || | Sbjct 81524 CGTCGTTCCAAAGGCCCATTTCGACAAGGTCCTTCAAGAGATAAGGATTGACAATCTGGA 81465 Query 75726 ATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCAT 75785 | ||||| | | || | || | ||| | ||| ||| ||||| || | |||||| Sbjct 81464 ACTCTCCGGCGAGAACACGGCGCGAGTAGAAATTTGAGGTGTATGGCTCGAAGCATTCAT 81405 Query 75786 TGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAA 75834 ||| |||||||| |||| || || || || ||||| || || || || Sbjct 81404 TGTAGCCCAAAATCTGAGAGGTCGACGCGGTAGGCATCGGAGCAACTAA 81356 >seq285 Length=150650 Score = 168 bits (186), Expect = 1e-36 Identities = 402/606 (66%), Gaps = 14/606 (2%) Strand=Plus/Plus Query 46629 ACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 46688 ||| |||||||| || | || ||||| | ||| | |||||| || || || || Sbjct 139065 ACAGGCAAAATCGGTGTGCATACCCTCATCGCGCGAAATCAGTTCGTTGGAGAAAGTAAG 139124 Query 46689 CCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAA 46748 ||||||||| || ||||||||||| ||||| || || | || || || ||| ||||| Sbjct 139125 CCCAGGCATGAGCCCACGCTTTTTCAGCCAGAAGATTGATGCAAACGAGCCACTGAAGAA 139184 Query 46749 TATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA-- 46806 | ||||| ||||| ||||| || | || | |||| || | | | ||| | Sbjct 139185 GACACCTTCAACAGCAGCGAAGGCAATTAGGCGCTCTGCGAAGGTAGACTCAGCGTCGCT 139244 Query 46807 -ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATT 46865 ||||| | | ||||| | |||||| || | | || || || || || || Sbjct 139245 GATCCAACGAAGTGCCCACTTAGCCTTCTTGCGAATGGAGGGAATGGTGAAGATGGCGTT 139304 Query 46866 AAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACAT 46925 || ||||||| || | ||| ||||| || |||||||| || | |||| ||| | Sbjct 139305 GAACAGAAAGTCGGCCTCTTTACTGTCTTTCACGTATGTATCAATCAGAAGAGAATAAGT 139364 Query 46926 TTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAAT 46985 || || ||||||||||| || ||||| || ||||| |||||| | || || | ||| Sbjct 139365 CTCAGAGTGAATGTTTTCCATCATAATCTGGAAGCCGTAGAAACATTTGGCCTCGGGAAT 139424 Query 46986 CTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGC 47045 ||||| || ||||| ||| | ||||||||| || || |||||||||||||| Sbjct 139425 ACCAACCTCACCACTGAATCGCTCAACGAGATTCTCATTGACAATGCCATCACTAGCAGC 139484 Query 47046 AAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTT---ATTCCA 47102 ||| || || | ||| | | ||| ||| | || || |||| || | ||| Sbjct 139485 AAAGAAAGCAAGAACACGGGACACAAAGTATCTCTCGTCATCGTTCAGCTTGTGCTCCCA 139544 Query 47103 GTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTT 47162 ||| | | || || || || | ||| || || ||||| ||||||||||| ||||| Sbjct 139545 GTCGTGAGTGTCCTTACCTAGGTCAATTTCCTCGGCCGTCCAAAATGACGCCTCGGCTTT 139604 Query 47163 TTTATACATATTCCATATATCACGA----TATTGGATCGGAAAAATAACAAATCTATTTG 47218 || || | ||| || ||| || | |||||| || | |||||| | |||| Sbjct 139605 CTTGTAAGCCTGCCAAAT----CGAGTTGTACTTGATCGGGAACAAAACAAACCGGTTTG 139660 Query 47219 GATTTT 47224 |||||| Sbjct 139661 GATTTT 139666 >seq295 Length=432776 Score = 100 bits (110), Expect = 4e-16 Identities = 143/200 (72%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 76616 TCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTC 76675 |||||||||||||| ||| |||||| || || | | | || || ||||| ||| Sbjct 224423 TCAGGTATCCATAGCGCATAAAATAGGTCGCGTGCCCGATACTCATCCTTTCCGTGATTT 224364 Query 76676 TTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATA 76735 || |||||||||| |||| | | |||||| | ||||||||| ||||| | || | || Sbjct 224363 TTCTTAAGATCTAAGAACCCAAAAATATCTGCATGCCATGGCTCTAG---TGTCACACTA 224307 Query 76736 A---CACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACT 76792 | |||| || | ||| || || |||||||| | ||||| || |||||| | ||| Sbjct 224306 ATTGCACCAGGCCTTTTGTTGCCGCCCTGATCAACGAATCTGCAAGCGTTATTGAATACT 224247 Query 76793 CTCAACATTGGAATAATGCC 76812 | ||||| |||| ||| || Sbjct 224246 CGTAACATGGGAACAATCCC 224227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712931771054400