Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq295 109 1e-18
seq274 105 2e-17
seq212 96.9 8e-15
>seq295
Length=432776
Score = 109 bits (120), Expect = 1e-18
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || | ||| ||||| ||||| |||||||||||||| |||| | ||| | |||||
Sbjct 305627 AGAACCAAATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGACCATCG 305686
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| || | ||| ||||| | | ||||||||||| ||
Sbjct 305687 TCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGGGGAATTCCTTCCTTGTCA 305746
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || ||||||| ||| | | |||| | ||||||||| || ||||| ||
Sbjct 305747 GAGATCTTACTCTTGACAGCCTCAATGGTGTCGCTAGACTCTACTTCTAGCGTAATGGTC 305806
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|||||||| | ||||| | ||| | |||||| ||
Sbjct 305807 TTGCCCGTTAACGTCTTGATGAAAATCTGCATCTT 305841
>seq274
Length=107525
Score = 105 bits (116), Expect = 2e-17
Identities = 161/228 (71%), Gaps = 6/228 (3%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || | |||||||||||||| || || |||||||| |||| | || |
Sbjct 41921 GAGACGGAGCACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCG 41980
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || ||||||||||| || | ||||||||| | || ||| || ||
Sbjct 41981 GCCATCATCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTC 42040
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAG 152062
||| || || || || |||| ||| | | |||| ||| ||| || || ||
Sbjct 42041 CTTATCGCTGATCTTGCTCTTCACAGCCTCGATGGTGTC---ACTCGACTCCACCTCGAG 42097
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC 152110
|||||||| || ||||| || || || | ||||| |||||| ||||
Sbjct 42098 GGTAATAGTCTTACCCGTCAGGGTTTTAATGAAGATCTGCATCGTACC 42145
>seq212
Length=31356
Score = 96.9 bits (106), Expect = 8e-15
Identities = 147/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || ||||| || ||||||||||| || | | || | ||||| || |
Sbjct 28258 CAAG-TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCGTCGA 28200
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || ||||||||||| || | ||||||||| | || || |||||||| || |
Sbjct 28199 GCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGAATGCCTTCCTTGTCGCTGA 28140
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || || |||| ||| | |||| | ||| || ||||| || ||||| || |
Sbjct 28139 TCTTGCTCTTCACAGCCTCGATCGTGTCGCTAGACTCGACCTCAAGGGTGATAGTCTTCC 28080
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||||| ||||| | ||||| ||||||
Sbjct 28079 CCGTGAGGGTCTTGATGAAGATCTGCAT 28052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153816438917945
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |