Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq212 167 5e-36
seq274 140 7e-28
seq295 136 8e-27
seq54 96.9 7e-15
>seq212
Length=31356
Score = 167 bits (184), Expect = 5e-36
Identities = 176/229 (77%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| |||||||| |||| || | |||| || || ||||||||||||||||
Sbjct 28279 ACCACCACGAAGGCGAAGCACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGA 28220
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| ||||||||||| || || || || ||||| ||||||| ||| || |||||| |||
Sbjct 28219 GAGGGTGCGGCCATCGTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGG 28160
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
||| || |||||||| |||| ||||| || || | ||||| ||||| || ||||
Sbjct 28159 AATGCCTTCCTTGTCGCTGATC-TTGCTCTTCACAGCCTCGATCGTGTCGCTAGACTCGA 28101
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
| || || ||||| ||||| ||||| | ||||| | ||| ||||||||
Sbjct 28100 CCTCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTGATGAAGATCTGCAT 28052
>seq274
Length=107525
Score = 140 bits (154), Expect = 7e-28
Identities = 170/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || |||| || | || || || || ||||||||||| |
Sbjct 41912 ACCACCACGGAGACGGAGCACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGA 41971
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||||||||| || || || || ||||| ||||||| ||| || |||||| |||
Sbjct 41972 AAGGGTGCGGCCATCATCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGG 42031
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
|| |||||||| || |||| ||||| || || | ||||| ||||| | || |
Sbjct 42032 GATGCCCTCCTTATCGCTGATC-TTGCTCTTCACAGCCTCGATGGTGTCACTCGACTCCA 42090
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
| ||||| || || ||||||||||||| || |||| ||| ||||||||
Sbjct 42091 CCTCGAGGGTAATAGTCTTACCCGTCAGGGTTTTAATGAAGATCTGCAT 42139
>seq295
Length=432776
Score = 136 bits (150), Expect = 8e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| ||||| || || || |||| ||| | ||| || ||||||||||||||||| | |
Sbjct 305612 CCGCCACGGAGACGTAGAACCAAATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAA 305671
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || || ||||| || || || || || |||||||| | ||| ||||||||| |||
Sbjct 305672 AGAGTACGACCATCGTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGGGGA 305731
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| || |||||||| |||||| || || | || || ||||| || || |||
Sbjct 305732 ATTCCTTCCTTGTCAGAGATCTTACTCTTGACAGCCTCAATGGTGTCGCTAGACTCTACT 305791
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || || || ||||| ||||| || ||||| | ||| |||||||| ||
Sbjct 305792 TCTAGCGTAATGGTCTTGCCCGTTAACGTCTTGATGAAAATCTGCATCTT 305841
>seq54
Length=1817
Score = 96.9 bits (106), Expect = 7e-15
Identities = 145/203 (71%), Gaps = 11/203 (5%)
Strand=Plus/Minus
Query 109934 AGATTGCAACATCATCAAATTGCGGGAACCCCCTAAAGCATATGATACCAAGGTTGATTG 109993
||||||| ||| ||||||||||||| || ||||||||| | |||||||| | ||
Sbjct 1698 AGATTGCGACACTATCAAATTGCGGGGACACCCTAAAGCTTTCAATACCAAGCCGGCGTG 1639
Query 109994 TGAAAGCATCAGCTGGCCGAGAACAGAACTC-GGGTATGGTAAAAATTCATATGATGCCA 110052
|| || | |||||||| | || | |||||||||||||| | | |||| |
Sbjct 1638 GAAACACAGTCGGTGGCCGAGTTAATGACCCTGGGTATGGTAAAAACTTGAAAGATGTTA 1579
Query 110053 CAATGGGCAATCCGCAGCCAAGCCTCTAAAGGAAAATTATT-----CCCATGAGGAAGGT 110107
|||||||||||||||||||||| |||||| || || || || ||||| ||
Sbjct 1578 CAATGGGCAATCCGCAGCCAAG-CTCTAAGGG----TTCTTTTGAACCTATGAGTGCAGT 1524
Query 110108 TCAACGACTAAACGGTGATGGGT 110130
||| ||||||| ||| |||||
Sbjct 1523 TCACAGACTAAATGGTAGTGGGT 1501
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046735243652930
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |