Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06] 295 sequences; 9,369,115 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq212 167 5e-36 seq274 140 7e-28 seq295 136 8e-27 seq54 96.9 7e-15 >seq212 Length=31356 Score = 167 bits (184), Expect = 5e-36 Identities = 176/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| |||||||| |||| || | |||| || || |||||||||||||||| Sbjct 28279 ACCACCACGAAGGCGAAGCACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGA 28220 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||||||||| || || || || ||||| ||||||| ||| || |||||| ||| Sbjct 28219 GAGGGTGCGGCCATCGTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGG 28160 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| || |||||||| |||| ||||| || || | ||||| ||||| || |||| Sbjct 28159 AATGCCTTCCTTGTCGCTGATC-TTGCTCTTCACAGCCTCGATCGTGTCGCTAGACTCGA 28101 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || || ||||| ||||| ||||| | ||||| | ||| |||||||| Sbjct 28100 CCTCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTGATGAAGATCTGCAT 28052 >seq274 Length=107525 Score = 140 bits (154), Expect = 7e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || | || || || || ||||||||||| | Sbjct 41912 ACCACCACGGAGACGGAGCACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGA 41971 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||||||||| || || || || ||||| ||||||| ||| || |||||| ||| Sbjct 41972 AAGGGTGCGGCCATCATCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGG 42031 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 || |||||||| || |||| ||||| || || | ||||| ||||| | || | Sbjct 42032 GATGCCCTCCTTATCGCTGATC-TTGCTCTTCACAGCCTCGATGGTGTCACTCGACTCCA 42090 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | ||||| || || ||||||||||||| || |||| ||| |||||||| Sbjct 42091 CCTCGAGGGTAATAGTCTTACCCGTCAGGGTTTTAATGAAGATCTGCAT 42139 >seq295 Length=432776 Score = 136 bits (150), Expect = 8e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || |||| ||| | ||| || ||||||||||||||||| | | Sbjct 305612 CCGCCACGGAGACGTAGAACCAAATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAA 305671 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || ||||| || || || || || |||||||| | ||| ||||||||| ||| Sbjct 305672 AGAGTACGACCATCGTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGGGGA 305731 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || |||||||| |||||| || || | || || ||||| || || ||| Sbjct 305732 ATTCCTTCCTTGTCAGAGATCTTACTCTTGACAGCCTCAATGGTGTCGCTAGACTCTACT 305791 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || || || ||||| ||||| || ||||| | ||| |||||||| || Sbjct 305792 TCTAGCGTAATGGTCTTGCCCGTTAACGTCTTGATGAAAATCTGCATCTT 305841 >seq54 Length=1817 Score = 96.9 bits (106), Expect = 7e-15 Identities = 145/203 (71%), Gaps = 11/203 (5%) Strand=Plus/Minus Query 109934 AGATTGCAACATCATCAAATTGCGGGAACCCCCTAAAGCATATGATACCAAGGTTGATTG 109993 ||||||| ||| ||||||||||||| || ||||||||| | |||||||| | || Sbjct 1698 AGATTGCGACACTATCAAATTGCGGGGACACCCTAAAGCTTTCAATACCAAGCCGGCGTG 1639 Query 109994 TGAAAGCATCAGCTGGCCGAGAACAGAACTC-GGGTATGGTAAAAATTCATATGATGCCA 110052 || || | |||||||| | || | |||||||||||||| | | |||| | Sbjct 1638 GAAACACAGTCGGTGGCCGAGTTAATGACCCTGGGTATGGTAAAAACTTGAAAGATGTTA 1579 Query 110053 CAATGGGCAATCCGCAGCCAAGCCTCTAAAGGAAAATTATT-----CCCATGAGGAAGGT 110107 |||||||||||||||||||||| |||||| || || || || ||||| || Sbjct 1578 CAATGGGCAATCCGCAGCCAAG-CTCTAAGGG----TTCTTTTGAACCTATGAGTGCAGT 1524 Query 110108 TCAACGACTAAACGGTGATGGGT 110130 ||| ||||||| ||| ||||| Sbjct 1523 TCACAGACTAAATGGTAGTGGGT 1501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046735243652930