Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F000950655.1_202015-02-06]
295 sequences; 9,369,115 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq274 104 6e-17
seq212 102 2e-16
>seq274
Length=107525
Score = 104 bits (114), Expect = 6e-17
Identities = 149/206 (72%), Gaps = 3/206 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||| | ||||| || || || || || || |||||||||||||| |||
Sbjct 42136 CAGATCTTCATTAAAACCCTGACGGGTAAGACTATTACCCTCGAGGTGGAGTCGAGTGAC 42077
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAG-GACAAAGAAGGAATCCCTCCGGACCAGCA 178042
||||||||| || || ||||| ||| || || || || ||||| || ||||||||
Sbjct 42076 ACCATCGAGGCTGTGAAGAGCAAGAT-CAGCGATAAGGAGGGCATCCCGCCTGACCAGCA 42018
Query 178043 ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGT 178102
|| || ||||||||||| || ||||| || ||||| | || ||| |||| || ||| |
Sbjct 42017 GCGTCTGATCTTCGCCGGCAAGCAGCTTGATGATGGCCGCACCCTTTCCGACTACAACAT 41958
Query 178103 CCAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || || || ||||
Sbjct 41957 TCAGAAGGAGTCTACTCTTCA-CTTG 41933
>seq212
Length=31356
Score = 102 bits (112), Expect = 2e-16
Identities = 151/209 (72%), Gaps = 9/209 (4%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980
|| || ||| | || || ||||| || || || |||||||| ||||| || |||
Sbjct 28055 CAGATCTTCATCAAGACCCTCACGGGGAAGACTATCACCCTTGAGGTCGAGTCTAGC--- 28111
Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAG-GACAAAGAAGGAATCCCTCCGGACCA 178039
||||| |||||| || || ||||| ||| ||||| ||||| || || || |||||
Sbjct 28112 GACACGATCGAGGCTGTGAAGAGCAAGAT-CAGCGACAAGGAAGGCATTCCGCCTGACCA 28170
Query 178040 GCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAA 178099
||| || || ||||||||||| || |||||||| ||||| | || || | || || ||
Sbjct 28171 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGACGATGGCCGCACCCTCTCTGACTACAA 28230
Query 178100 CGTCCAAAAAGAATCAACACTGCATCTTG 178128
| |||| || || || || || || ||||
Sbjct 28231 CATCCAGAAGGAGTCCACGCTCCA-CTTG 28258
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203726650272230
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |