Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq1 228 1e-54
>seq1
Length=2987201
Score = 228 bits (252), Expect = 1e-54
Identities = 709/1083 (65%), Gaps = 42/1083 (4%)
Strand=Plus/Minus
Query 53782 CTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 53841
|||||||||||| | ||| | || || ||||| ||| |||||||| || || ||
Sbjct 1206937 CTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCAT 1206878
Query 53842 GAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTT 53901
||| || ||||||| || |||| | || | ||| || | ||| | |||||||
Sbjct 1206877 GAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAAGCTTCTGAGCCTT 1206818
Query 53902 TATTATA-GA------TTTGTATCTCTTTTCT--CTT-TCGTATAGTGTATACAATCGTT 53951
||| || || ||| | | |||||| ||| ||||| || | |
Sbjct 1206817 TATGGTACGACGGCCCTTTCCAGC-CTTTTCATACTTCTCGTAAAGAGCCT--------- 1206768
Query 53952 CAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACC 54011
|||| || ||||| |||| | | | ||||| ||||| | || ||||| | | ||
Sbjct 1206767 CAAATTCATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATAAGTGTCC 1206708
Query 54012 ACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATA 54071
| || | || | || || || ||||| || ||||| ||||||||||| || || || |
Sbjct 1206707 AATCAGCATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGAAAA 1206648
Query 54072 GATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAA 54131
|||| | | | | || || || || ||| || || |||| || | | |
Sbjct 1206647 GATCGCGTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATAAAGTCGAACA 1206588
Query 54132 TATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCT 54191
||| ||||||||| || | ||| |||| | | ||||| || ||||| || || |
Sbjct 1206587 CATCGTCATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTCCCACCTT 1206528
Query 54192 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATG 54251
| || | ||| | ||| ||||| || || || | |||||| |||| ||| ||||| || |
Sbjct 1206527 GGTCGACGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATCCCATTCGAGG 1206468
Query 54252 CACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTA--CTAATTGATAGACC 54309
|| || || || | ||||| ||| | || || || ||| | | ||| | ||
Sbjct 1206467 TTCCGTTCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCACACTGA--GCCC 1206410
Query 54310 TATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 54369
||||| || || || ||||| | ||||| | || | ||||| || || |||||
Sbjct 1206409 AATCCCACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTAAATACCCTC 1206350
Query 54370 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGA-CATTTGGTGACGACTAGTTC 54428
||| ||| ||| ||||||| | || || || | || ||| || | |||||
Sbjct 1206349 AATAGAATCGTCCTTCATGTTTACGAGGAAGCA-CGAGCTCATCTGAGGCTTTGGAGTTC 1206291
Query 54429 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 54488
| ||||| | ||||| || || ||||| || || |||| | || | || ||||| |
Sbjct 1206290 CTGCATTGTACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGACATAAGGTTGTAAG 1206231
Query 54489 TCTCGATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACAT 54546
|||| | || | ||| || || | |||||| || | | ||| ||||| | |||
Sbjct 1206230 TCTCTACGACTTTGGGTATGTC--ATCGCCATGAATACCAATGGAGACGCGCATGATCAT 1206173
Query 54547 GTGCTGAGGTCTTTCAACGATCTTGTTG-TTTATTTTCAGCAAGTAGGATTTTTCCAAAG 54605
|||||||| | || || ||| | |||| ||||||||||||||| || | |
Sbjct 1206172 ATGCTGAGGGCGCTCGT-GAACTTTTCCATTTAGTTTCAGCAAGTAGGAGCGCTCTAGCG 1206114
Query 54606 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTT 54665
|||| ||||||||||||||||| ||||| || || |||| || | |||||||| |
Sbjct 1206113 TTTTGAAACCAAAATAGTTGTAATTGAAGTCACGATCATAAACGATGGCAGAGTTGAGCT 1206054
Query 54666 TATCCTTATATTTGTTAACTACATCCATGGTAATACTT-----GAAATAATCGGAGAATG 54720
|| || || | || || || || |||| | ||||| || ||||||||
Sbjct 1206053 CTTCAGCATGCTTCTGGACAACGTC----GT-ATACCTCTTGGGAAATCATTGGAGAATG 1205999
Query 54721 TTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGttt 54780
|| |||| |||||| |||||| || | ||||| || || | || || | |||
Sbjct 1205998 CTTGTCATTGCGAGGATTCACATAGCGGAAAAGATCCTCAATGACCTGGCTGAACACTTT 1205939
Query 54781 ttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGG 54840
|||||| | |||||| ||||| || || || |||| || || || |||||| || ||
Sbjct 1205938 TTTTGTCTGTTTGTGGAGATTAGACACTGCAATTCGTGCAGCAAGCTGGGCATAGTCAGG 1205879
Query 54841 ATG 54843
||
Sbjct 1205878 GTG 1205876
Score = 165 bits (182), Expect = 1e-35
Identities = 582/902 (65%), Gaps = 24/902 (3%)
Strand=Plus/Minus
Query 23859 ACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGGAT 23918
|||||||| || || ||||| || || || | | || || || ||||| || || |
Sbjct 897295 ACACGTTTCTCAAAGAAATTGGTCTTTCCAGCAAGAGAGATGTTCTCCATAAAGTCAAAC 897236
Query 23919 GGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATCAATCTATCTGCGACA 23978
|||||||| ||||| |||| | || ||||| | | | ||| | || |||||
Sbjct 897235 GGATTGGTCACATTGTAGACGCGCTTGTGGCCCAAAGCCAACAGCAAACGGTCGGCGACG 897176
Query 23979 AACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCC 24038
||||| | |||| ||||| | || ||||| || | ||| | || || | |||
Sbjct 897175 AACTCGACATATTGGTTCATGAGGTCGGCGTTCATGCCGAGAAGACTTACAGGCAAAGCA 897116
Query 24039 ACA-GTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTC 24097
| | ||| | |||||| ||||| ||| || || || || || ||| | | |
Sbjct 897115 TCGCGGAAGTA-TTCTTGCTCAATGTCGACGGCTTCAGTGATGATTC-TCTCAACGATAG 897058
Query 24098 TTCA-CTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGAC 24156
| || || | | | || || | || | | ||| || |||||| ||| | ||
Sbjct 897057 CACGGCTAGGGCGGTTCTGCAAGTGGCTGAATAGGAGACAGGCAAAATCGGTGTGCATAC 896998
Query 24157 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 24216
|||| || | ||| | ||||||||| || || || || ||||| || ||||||||||
Sbjct 896997 CCTCATCGCGCGAAATCAGTTCGTTGGAGAAAGTAAGCCCAGGCATGAGCCCACGCTTTT 896938
Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276
| ||||| || || || ||||| || ||| ||||| | ||||| || || || ||||
Sbjct 896937 TCAGCCAGAAGATTGATGCAAACGAGCCACTGAAGAAGACACCTTCAACAGCAGCGAAGG 896878
Query 24277 CAATAAGTCTTTCTCCATA---------ACCGGCGCTGTCATGTATCCACTTTTGAGCCC 24327
|||| || | ||| | | | || ||||| ||||| | ||||
Sbjct 896877 CAATTAGGCGCTCTGCGAAGGTAGACTCAGCGTCGCTG------ATCCAACGAAGTGCCC 896824
Query 24328 AATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGttttttt 24387
| | |||||||| | | || || || || || || || ||| ||| |
Sbjct 896823 ACTTAGCCTTCTTGCGAATGGAGGGAATGGTGAAGATGGCGTTGAACAGAAAGTCGGCCT 896764
Query 24388 CATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTT 24447
| ||||| ||||| || ||||||||||||| |||| ||| | || || ||||||||||
Sbjct 896763 CTTTACTGTCTTTCACGTATGTATCAATCAGAAGAGAATAAGTCTCAGAGTGAATGTTTT 896704
Query 24448 CAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAA 24507
| || || || || |||||||||||| | ||||||| ||| || || || |
Sbjct 896703 CCATCATAATCTGGAAGCCGTAGAAACATTTGGCCTCGGGAATACCAACCTCACCACTGA 896644
Query 24508 ATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACAT 24567
|||| || | | ||| ||||| || || || ||||| || ||||| || || | |||
Sbjct 896643 ATCGCTCAACGAGATTCTCATTGACAATGCCATCACTAGCAGCAAAGAAAGCAAGAACAC 896584
Query 24568 GTTTTATAAAATATTTTTCGTC-TGGTGTTAGTTT---ATTCCAATCATTGATATCTTTA 24623
| | ||| ||| | ||||| | || | || || | ||| || | | || |||
Sbjct 896583 GGGACACAAAGTATCTCTCGTCATCGT-TCAGCTTGTGCTCCCAGTCGTGAGTGTCCTTA 896525
Query 24624 GATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAG 24683
|| || | ||| || | ||||||||||| ||||| || || || || | |||
Sbjct 896524 CCTAGGTCAATTTCCTCGGCCGTCCAAAATGACGCCTCGGCTTTCTTGTAAGCCTGCCAA 896465
Query 24684 ATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGGATTGGT 24743
|| | || | || || || | |||||| | |||||||||| |||||| ||
Sbjct 896464 ATCGAGTTGTACTTGATCGGGAACAAAACAAACCGGTTTGGATTTTCCTGAAGGATGGGC 896405
Query 24744 TC 24745
||
Sbjct 896404 TC 896403
Score = 93.3 bits (102), Expect = 5e-14
Identities = 147/207 (71%), Gaps = 4/207 (2%)
Strand=Plus/Minus
Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867
||||||||||| || || || |||| || || || ||||||||||| || || || ||
Sbjct 1207926 GTGAATTGAATCGGTGCCGAAGCGGCTTGAGTGCGCAGATAGTACATACCGGTCTTGAGC 1207867
Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTG--GAATAACTCGGATCTGCTA 52925
|| | ||| ||||| || |||||||| || || ||| | | |||| ||| |
Sbjct 1207866 CCTTTAGACCAGCCGTAGAAGTGCATACTCGTAAGCTTGCCCATTGTGGGGGAT-TGC-A 1207809
Query 52926 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 52985
||| ||| |||| | |||||||| |||||||| | ||| ||| | || ||||| | |
Sbjct 1207808 TATAGATGTTCAGACTCTGACTTTGGTCGATGAAAGGTCCTCTGCCAGCGGCCATATCGA 1207749
Query 52986 TGATCGTCTTTTGTGGAATTTCCCAAA 53012
| ||| |||||| || |||||||
Sbjct 1207748 TAATCACCTTTTGACTGATCTCCCAAA 1207722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721481255680
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