Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq2 118 9e-22 seq1 100 2e-16 >seq2 Length=2890200 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | |||||||| || ||||||||||| ||| | ||||| ||| || Sbjct 724340 CACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCATCATC 724399 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || ||| |||| ||||||||||| || || || ||||||||||| || | Sbjct 724400 AAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTATCGCT 724459 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || |||| |||||| | ||| ||||||| ||| | || || Sbjct 724460 GATCTTGCTCTTCACAGCCTCGATGGTGTCACTCGACTCCACCTCGAGGGTAATAGTCTT 724519 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| ||||| | || |||||||| Sbjct 724520 ACCCGTCAGGGTTTTAATGAAGATCTGCAT 724549 >seq1 Length=2987201 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||||| || ||||| || || |||||||| || | ||||| ||| || Sbjct 2570385 CACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCGTC 2570326 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| |||| ||||||||||| || || || ||||| |||||||| | Sbjct 2570325 GAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGAATGCCTTCCTTGTCGCT 2570266 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || |||| ||||| | ||||||||| | ||| | || || Sbjct 2570265 GATCTTGCTCTTCACAGCCTCGATCGTGTCGCTAGACTCGACCTCAAGGGTGATAGTCTT 2570206 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || | || |||||||| Sbjct 2570205 CCCCGTGAGGGTCTTGATGAAGATCTGCAT 2570176 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/209 (69%), Gaps = 9/209 (4%) Strand=Plus/Minus Query 134127 TTTACGCGTTTCATGAATAGATCGGGAATCCACAGGCCGAGCATTAAATCGCGAGCTTTA 134186 || ||||| |||||||| |||||||||||||| ||| | | | | |||||| || | Sbjct 1206693 TTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGAAAAGATCGCGTGCGCGA 1206634 Query 134187 GTGTCTTCGGAGCC---CATGTTGCGTCTCAAGTTGAGAAACTCATAAATTTCCGGATGC 134243 | ||||| ||| | ||||| || || || ||| || | | || |||| Sbjct 1206633 ATCTCTTCCTTGCCGTGATTTTTGCG---CAGGTCGATAAAGTCGAACACATCGTCATGC 1206577 Query 134244 CACGGCTCGATGTAGGCGGCGAGGGCACCTTTTCGC---TTACCACCCTGGTCGACGTGA 134300 |||||||||| |||| ||| | |||||| ||| || ||||| |||||||||| | Sbjct 1206576 CACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTCCCACCTTGGTCGACGTAA 1206517 Query 134301 CGCACCATGTTGTTGAAGACTCTCAACAT 134329 || | |||||||| | || | |||||| Sbjct 1206516 CGAGCAGTGTTGTTGTACACACGCAACAT 1206488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830315403072