Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq3 86.0 5e-12 >seq3 Length=2072284 Score = 86.0 bits (94), Expect = 5e-12 Identities = 286/446 (64%), Gaps = 23/446 (5%) Strand=Plus/Minus Query 20215 GAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTT 20274 ||||| || ||||| || || |||||||| || ||| | |||||||| || || ||| | Sbjct 1425434 GAGGGCGACTTGGGACCGGTTTATGGATTCCAGTGGCGCCATTTTGGTGCAGAGTATCGT 1425375 Query 20275 GACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTA 20334 | | | || | ||| || |||| || || || || | | || ||||| | Sbjct 1425374 GGCTGCGATGCAGACTATACAGGTGAAGGTGTTGACCAGTTGAATGAGGTGATTAAGCTT 1425315 Query 20335 ATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTG 20394 || |||| |||| || |||||||||||||||| || ||||| | || | | Sbjct 1425314 ATAAAAAGTGACCCCTACTCGAGAAGAATTATTTTATCTGCGTGGAATCCCGCAGCCGAG 1425255 Query 20395 CCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAAT----AA 20450 | ||| |||||| | || ||||| || || | | |||||||||||| | ||| || Sbjct 1425254 CGTTTTATGGCTCTTCCGCCATGCCACATATTGAGTCAATTTTACGTTTC-AATGCCGAA 1425196 Query 20451 TG---------------AAT---TGTCGTGTCAAATGTATCAACGATCCGCTGATATGGG 20492 | ||| | ||||| ||||||||||| | |||||||| Sbjct 1425195 AGGTGAGCAAGGCCCAAAATACCTCAACTGTCAGATGTATCAACGTAGTGGAGATATGGG 1425136 Query 20493 ACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGT 20552 || || ||||| ||||| |||||| || || | | || | |||||||| || || Sbjct 1425135 CCTTGGAGTTCCCTTCAACATTGCATCCTACGCATTATTGACTAAAATGATTGCGCACGT 1425076 Query 20553 TACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAA 20612 || | || |||| ||| |||| | | || ||||| ||| | ||| || Sbjct 1425075 CACCGGCTTGCTCCCGGGAACCTTCATCCATGCACTGGGTGACGCTCATGTCTACGCCAA 1425016 Query 20613 TCATATAGAACCTTTAAAATTACAGT 20638 || | |||||||| ||| |||||| Sbjct 1425015 CCACGTTGAACCTTTGAAAATACAGT 1424990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399183922159120