Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq3 86.0 5e-12
>seq3
Length=2072284
Score = 86.0 bits (94), Expect = 5e-12
Identities = 286/446 (64%), Gaps = 23/446 (5%)
Strand=Plus/Minus
Query 20215 GAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTT 20274
||||| || ||||| || || |||||||| || ||| | |||||||| || || ||| |
Sbjct 1425434 GAGGGCGACTTGGGACCGGTTTATGGATTCCAGTGGCGCCATTTTGGTGCAGAGTATCGT 1425375
Query 20275 GACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTA 20334
| | | || | ||| || |||| || || || || | | || ||||| |
Sbjct 1425374 GGCTGCGATGCAGACTATACAGGTGAAGGTGTTGACCAGTTGAATGAGGTGATTAAGCTT 1425315
Query 20335 ATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTG 20394
|| |||| |||| || |||||||||||||||| || ||||| | || | |
Sbjct 1425314 ATAAAAAGTGACCCCTACTCGAGAAGAATTATTTTATCTGCGTGGAATCCCGCAGCCGAG 1425255
Query 20395 CCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAAT----AA 20450
| ||| |||||| | || ||||| || || | | |||||||||||| | ||| ||
Sbjct 1425254 CGTTTTATGGCTCTTCCGCCATGCCACATATTGAGTCAATTTTACGTTTC-AATGCCGAA 1425196
Query 20451 TG---------------AAT---TGTCGTGTCAAATGTATCAACGATCCGCTGATATGGG 20492
| ||| | ||||| ||||||||||| | ||||||||
Sbjct 1425195 AGGTGAGCAAGGCCCAAAATACCTCAACTGTCAGATGTATCAACGTAGTGGAGATATGGG 1425136
Query 20493 ACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGT 20552
|| || ||||| ||||| |||||| || || | | || | |||||||| || ||
Sbjct 1425135 CCTTGGAGTTCCCTTCAACATTGCATCCTACGCATTATTGACTAAAATGATTGCGCACGT 1425076
Query 20553 TACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAA 20612
|| | || |||| ||| |||| | | || ||||| ||| | ||| ||
Sbjct 1425075 CACCGGCTTGCTCCCGGGAACCTTCATCCATGCACTGGGTGACGCTCATGTCTACGCCAA 1425016
Query 20613 TCATATAGAACCTTTAAAATTACAGT 20638
|| | |||||||| ||| ||||||
Sbjct 1425015 CCACGTTGAACCTTTGAAAATACAGT 1424990
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399183922159120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |