Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 3e-13 seq3 86.0 1e-11 >seq1 Length=2987201 Score = 91.5 bits (100), Expect = 3e-13 Identities = 156/220 (71%), Gaps = 10/220 (5%) Strand=Plus/Minus Query 94408 TCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGGCCAGGGCAC 94467 ||||| |||||||| | |||| ||| || || || | ||||| | |||||||||||| Sbjct 1206789 TCATACTTCTCGTAAAGAGCCTCAAATTCATCTCCGTAAACGTCAGCAAGGCCAGGGCAT 1206730 Query 94468 TCGTGGGGGCACATCAGGGACCAAT--TCTTCCCAGCCTTCACTCTCTCCATGAAGAGAT 94525 |||| ||||||||| || | ||||| | ||| || || || | || |||||| |||| Sbjct 1206729 TCGTTGGGGCACATAAGTGTCCAATCAGCATCC--GCTTTGACGCGCTTCATGAACAGAT 1206672 Query 94526 CAGATACCCAGATAGCTGGGAAAAGATCCCTCGTCCTCAAA--TCTTCATTACCGGCATT 94583 | | | ||| | || |||||||| | ||| | | || ||||| || ||| ||| Sbjct 1206671 CGGGAATCCAAAGGGCCATGAAAAGAT--CGCGTGCGCGAATCTCTTCCTTGCCGTGATT 1206614 Query 94584 CTTTCTGCA-GTCAATAAAGTCCTTCACGTCCAGATGCCA 94622 ||| ||| ||| |||||||| ||| || |||||| Sbjct 1206613 -TTTGCGCAGGTCGATAAAGTCGAACACATCGTCATGCCA 1206575 >seq3 Length=2072284 Score = 86.0 bits (94), Expect = 1e-11 Identities = 99/131 (76%), Gaps = 8/131 (6%) Strand=Plus/Plus Query 94191 AGCCAAATTGCACACTGCAGTTTC---CTCCGAATCACTGTACTGGACAATTTCAGTGCA 94247 ||| | ||||||||| ||||| || ||||||| | |||| || ||||| ||||| Sbjct 621729 AGCGAGATTGCACACGGCAGTCTCGCTCTCCGAAGAA---TACTCTACTATTTCGGTGCA 621785 Query 94248 CAAATTTGAAGACTTGATGATGCCGACATTTTCTTGGTTAGACTTTCTATTGATGGTATC 94307 || ||||||||| ||||| |||| | ||| | ||||||||||| |||||| || ||| Sbjct 621786 CAGATTTGAAGATTTGATTGTGCCTAGATTCTTCTGGTTAGACTTGCTATTGCAGGCATC 621845 Query 94308 CT--TAAAGCA 94316 | ||||||| Sbjct 621846 TTTGTAAAGCA 621856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583797135280