Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq1 91.5 3e-13
seq3 86.0 1e-11
>seq1
Length=2987201
Score = 91.5 bits (100), Expect = 3e-13
Identities = 156/220 (71%), Gaps = 10/220 (5%)
Strand=Plus/Minus
Query 94408 TCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGGCCAGGGCAC 94467
||||| |||||||| | |||| ||| || || || | ||||| | ||||||||||||
Sbjct 1206789 TCATACTTCTCGTAAAGAGCCTCAAATTCATCTCCGTAAACGTCAGCAAGGCCAGGGCAT 1206730
Query 94468 TCGTGGGGGCACATCAGGGACCAAT--TCTTCCCAGCCTTCACTCTCTCCATGAAGAGAT 94525
|||| ||||||||| || | ||||| | ||| || || || | || |||||| ||||
Sbjct 1206729 TCGTTGGGGCACATAAGTGTCCAATCAGCATCC--GCTTTGACGCGCTTCATGAACAGAT 1206672
Query 94526 CAGATACCCAGATAGCTGGGAAAAGATCCCTCGTCCTCAAA--TCTTCATTACCGGCATT 94583
| | | ||| | || |||||||| | ||| | | || ||||| || ||| |||
Sbjct 1206671 CGGGAATCCAAAGGGCCATGAAAAGAT--CGCGTGCGCGAATCTCTTCCTTGCCGTGATT 1206614
Query 94584 CTTTCTGCA-GTCAATAAAGTCCTTCACGTCCAGATGCCA 94622
||| ||| ||| |||||||| ||| || ||||||
Sbjct 1206613 -TTTGCGCAGGTCGATAAAGTCGAACACATCGTCATGCCA 1206575
>seq3
Length=2072284
Score = 86.0 bits (94), Expect = 1e-11
Identities = 99/131 (76%), Gaps = 8/131 (6%)
Strand=Plus/Plus
Query 94191 AGCCAAATTGCACACTGCAGTTTC---CTCCGAATCACTGTACTGGACAATTTCAGTGCA 94247
||| | ||||||||| ||||| || ||||||| | |||| || ||||| |||||
Sbjct 621729 AGCGAGATTGCACACGGCAGTCTCGCTCTCCGAAGAA---TACTCTACTATTTCGGTGCA 621785
Query 94248 CAAATTTGAAGACTTGATGATGCCGACATTTTCTTGGTTAGACTTTCTATTGATGGTATC 94307
|| ||||||||| ||||| |||| | ||| | ||||||||||| |||||| || |||
Sbjct 621786 CAGATTTGAAGATTTGATTGTGCCTAGATTCTTCTGGTTAGACTTGCTATTGCAGGCATC 621845
Query 94308 CT--TAAAGCA 94316
| |||||||
Sbjct 621846 TTTGTAAAGCA 621856
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583797135280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |