Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq1 214 2e-50
>seq1
Length=2987201
Score = 214 bits (236), Expect = 2e-50
Identities = 724/1112 (65%), Gaps = 28/1112 (3%)
Strand=Plus/Minus
Query 63020 CTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 63079
|||||| ||||| | ||| | || || ||||| ||| |||||||| || || ||
Sbjct 1206937 CTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCAT 1206878
Query 63080 GAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCT 63138
||| || ||||||| || |||||| || | ||| || | ||| | | || ||||||
Sbjct 1206877 GAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAA-GCTTCTGAGCCT 1206819
Query 63139 TTATTATA-GATTTGTATCTCCTTTCTCTTTCGTA--TAGAGTATACAATCGTTCGAACT 63195
|||| || || | ||| || |||| || | ||| | | | || || |
Sbjct 1206818 TTATGGTACGACGGCCCTTTCCAGCCT-TTTCATACTTCTCGTAAAGAGCC--TCAAATT 1206762
Query 63196 CGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTC 63255
| ||||| |||| | | | | ||| ||||| | || ||||| | | ||| ||
Sbjct 1206761 CATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATAAGTGTCCAATCAG 1206702
Query 63256 CGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 63315
| || | || || || ||||| || ||||| ||||||||||| || || || ||||| |
Sbjct 1206701 CATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGAAAAGATCGC 1206642
Query 63316 TTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAG 63375
|| | | || || || || ||| || || |||| || | | | |||
Sbjct 1206641 GTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATAAAGTCGAACACATCGT 1206582
Query 63376 AATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTA 63435
||||||||| || | ||| ||||| | | ||||| || ||||| || || || || |
Sbjct 1206581 CATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTCCCACCTTGGTCGA 1206522
Query 63436 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCAT 63495
||| | ||| ||||| || || || | |||||| |||| ||| || || || | || |
Sbjct 1206521 CGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATCCCATTCGAGGTTCCGT 1206462
Query 63496 TGGTACCGGAGATATAGCCTCCACTGGCACGAATATTA--CTAATTGATAGACCTATTCC 63553
| ||||| | ||||| ||| | || || || ||| | | ||| | || || ||
Sbjct 1206461 TCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCACACTGA--GCCCAATCCC 1206404
Query 63554 CCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCT 63613
|| || || ||||| | ||||| | || | || || || || || || ||
Sbjct 1206403 ACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTAAATACCCTCAATAGA 1206344
Query 63614 ATCATCGATCATGTTAAGTAGAAAACAGCTAGA-CATTTGGTGACGAGTAGTTCCCGCAT 63672
||| || ||||||| | || || || | || ||| || | | |||||| ||||
Sbjct 1206343 ATCGTCCTTCATGTTTACGAGGAAGCA-CGAGCTCATCTGAGGCTTTGGAGTTCCTGCAT 1206285
Query 63673 TAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAA 63732
| | ||||| || || ||||| || || |||| | || | || ||||| ||||| |
Sbjct 1206284 TGTACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGACATAAGGTTGTAAGTCTCTA 1206225
Query 63733 TAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACATGTGCTG 63790
|| | ||| || || | |||||| || | | ||| ||||| | ||| |||||
Sbjct 1206224 CGACTTTGGGTATGTC--ATCGCCATGAATACCAATGGAGACGCGCATGATCATATGCTG 1206167
Query 63791 AGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAA 63850
||| | || || ||| |||| ||||| ||||||||| || | ||||| ||
Sbjct 1206166 AGGGCGCTCGTGAACTTTTCCATTTAGTTTCAGCAAGTAGGAGCGCTCTAGCGTTTTGAA 1206107
Query 63851 ACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTT 63910
||||||||||||||| ||||| || || |||| || | || ||||||| ||
Sbjct 1206106 ACCAAAATAGTTGTAATTGAAGTCACGATCATAAACGATGGCAGAGTTGAGCTCTTCAGC 1206047
Query 63911 ATATTTGTTAACTATATCCATGGTAATACTT-----GAAATAATCGGAGAATGTTTCCCA 63965
|| || | || | | | || |||| | ||||| || |||||||| || ||
Sbjct 1206046 ATGCTTCTGGACAA----CGTCGT-ATACCTCTTGGGAAATCATTGGAGAATGCTTGTCA 1205992
Query 63966 TTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTT 64025
|| |||||| |||||| ||| | |||||| || || | || || | |||||||||
Sbjct 1205991 TTGCGAGGATTCACATAGCGGAAAAGATCCTCAATGACCTGGCTGAACACTTTTTTTGTC 1205932
Query 64026 TCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGT 64085
| ||||| ||||| || | || |||| || || || |||||| || || ||
Sbjct 1205931 TGTTTGTGGAGATTAGACACTGCAATTCGTGCAGCAAGCTGGGCATAGTCAGGGTGGACC 1205872
Query 64086 GTAGTACAAGTGGCTGCTATTTCGGCTGCCAG 64117
||||| | || ||| | ||||| |||||
Sbjct 1205871 GTAGTCATTGACGCAGCTGTCTCGGCAGCCAG 1205840
Score = 188 bits (208), Expect = 9e-43
Identities = 577/885 (65%), Gaps = 24/885 (3%)
Strand=Plus/Minus
Query 33306 ACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAAC 33365
|||||||| || || ||||| || ||||| | | || || || ||||| || ||||||
Sbjct 897295 ACACGTTTCTCAAAGAAATTGGTCTTTCCAGCAAGAGAGATGTTCTCCATAAAGTCAAAC 897236
Query 33366 GGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACG 33425
|||||||| |||||||| | || ||||| | | | ||| | || ||||||
Sbjct 897235 GGATTGGTCACATTGTAGACGCGCTTGTGGCCCAAAGCCAACAGCAAACGGTCGGCGACG 897176
Query 33426 AATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTAACTGGAAGAGCC 33485
|| || | |||| ||||| | || ||||| || | || | || || | |||
Sbjct 897175 AACTCGACATATTGGTTCATGAGGTCGGCGTTCATGCCGAGAAGACTTACAGGCAAAGCA 897116
Query 33486 ACA-GTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAAATCT-AACGGTTT 33543
| | ||| | |||||| |||||| || || | || || || ||| |||| |
Sbjct 897115 TCGCGGAAGTA-TTCTTGCTCAATGTCGACGGCTTCAGTGATGATTC-TCTCAACGATAG 897058
Query 33544 CTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGAC 33603
| || || | | || || | || | | ||| || |||||| ||||| ||
Sbjct 897057 CACGGCTAGGGCGGTTCTGCAAGTGGCTGAATAGGAGACAGGCAAAATCGGTGTGCATAC 896998
Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663
|||| || | ||| | |||||| || || || || || ||||| || ||||||||||
Sbjct 896997 CCTCATCGCGCGAAATCAGTTCGTTGGAGAAAGTAAGCCCAGGCATGAGCCCACGCTTTT 896938
Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723
| ||||| || || || || || || || ||||||| ||||| || ||||| ||||
Sbjct 896937 TCAGCCAGAAGATTGATGCAAACGAGCCACTGAAGAAGACACCTTCAACAGCAGCGAAGG 896878
Query 33724 CAATAAGTCTCTCTCCATA---------ACCGGCGCTGTCATGTATCCACTTTTGAGCCC 33774
|||| || | |||| | | | || ||||| ||||| | ||||
Sbjct 896877 CAATTAGGCGCTCTGCGAAGGTAGACTCAGCGTCGCTG------ATCCAACGAAGTGCCC 896824
Query 33775 AATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttttttt 33834
| | |||||||| | | || || || ||||| || || ||| ||| |
Sbjct 896823 ACTTAGCCTTCTTGCGAATGGAGGGAATGGTGAAGATGGCGTTGAACAGAAAGTCGGCCT 896764
Query 33835 CATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTT 33894
| ||||| ||||| || || ||||| |||| |||| ||| | || || ||||||||||
Sbjct 896763 CTTTACTGTCTTTCACGTATGTATCAATCAGAAGAGAATAAGTCTCAGAGTGAATGTTTT 896704
Query 33895 CAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAA 33954
| || ||||| || |||||||||||| | ||||||| ||| || || || |
Sbjct 896703 CCATCATAATCTGGAAGCCGTAGAAACATTTGGCCTCGGGAATACCAACCTCACCACTGA 896644
Query 33955 ATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACAT 34014
|||| || | | ||| ||||| || || |||||||| || ||||| || || | |||
Sbjct 896643 ATCGCTCAACGAGATTCTCATTGACAATGCCATCACTAGCAGCAAAGAAAGCAAGAACAC 896584
Query 34015 GTTTTATAAAATATTTTTCGTC-TGGTGTTAGTTT---ATTCCAATCATTGATATCTTTA 34070
| | ||| ||| | ||||| | || | || || | ||| || | | || |||
Sbjct 896583 GGGACACAAAGTATCTCTCGTCATCGT-TCAGCTTGTGCTCCCAGTCGTGAGTGTCCTTA 896525
Query 34071 GATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAG 34130
|| || | ||| || | ||||||||||| ||||| || || || || | |||
Sbjct 896524 CCTAGGTCAATTTCCTCGGCCGTCCAAAATGACGCCTCGGCTTTCTTGTAAGCCTGCCAA 896465
Query 34131 ATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 34175
|| | || | ||| ||||| | |||||| | |||||||||
Sbjct 896464 ATCGAGTTGTACTTGATCGGGAACAAAACAAACCGGTTTGGATTT 896420
Score = 98.7 bits (108), Expect = 1e-15
Identities = 148/207 (71%), Gaps = 4/207 (2%)
Strand=Plus/Minus
Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105
||||||||||| || || || |||| || || || ||||||||||| || || || ||
Sbjct 1207926 GTGAATTGAATCGGTGCCGAAGCGGCTTGAGTGCGCAGATAGTACATACCGGTCTTGAGC 1207867
Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG--GAATAACTCGGATCTGCTA 62163
|| | ||| ||||| || ||||||||||| || ||| | | |||| ||| |
Sbjct 1207866 CCTTTAGACCAGCCGTAGAAGTGCATACTCGTAAGCTTGCCCATTGTGGGGGAT-TGC-A 1207809
Query 62164 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 62223
||| ||| |||| | |||||||| |||||||| | ||| ||| | || ||||| | |
Sbjct 1207808 TATAGATGTTCAGACTCTGACTTTGGTCGATGAAAGGTCCTCTGCCAGCGGCCATATCGA 1207749
Query 62224 TGATCGTCTTTTGTGCAATTTCCCAAA 62250
| ||| |||||| || |||||||
Sbjct 1207748 TAATCACCTTTTGACTGATCTCCCAAA 1207722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817474036480
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