Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq1 239 6e-58
>seq1
Length=2987201
Score = 239 bits (264), Expect = 6e-58
Identities = 735/1120 (66%), Gaps = 44/1120 (4%)
Strand=Plus/Minus
Query 65813 CTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 65872
|||||||||||| | ||| | || || ||||| ||| |||||||| || || ||
Sbjct 1206937 CTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCAT 1206878
Query 65873 GAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCT 65931
||| || ||||||| || |||||| || | ||| || | ||| | | || ||||||
Sbjct 1206877 GAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAA-GCTTCTGAGCCT 1206819
Query 65932 TTATTATA-GA------TTTGTATCTCTTTTCT--CTT-TCGTATAGTGTATACAATCGT 65981
|||| || || ||| | | |||||| ||| ||||| || | | |||
Sbjct 1206818 TTATGGTACGACGGCCCTTTCCAGC-CTTTTCATACTTCTCGTAAAGAGCCTCAAAT--- 1206763
Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041
|| ||||| |||| | | | ||||| ||||| | || ||||| | | |
Sbjct 1206762 ------TCATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATAAGTGTC 1206709
Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 66101
|| || | || | || || || ||||| || ||||| ||||||||||| || || ||
Sbjct 1206708 CAATCAGCATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGAAA 1206649
Query 66102 AAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 66161
| ||| | | | | || || || || ||| || || |||| || | |
Sbjct 1206648 AGATCGCGTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATAAAGTCGAAC 1206589
Query 66162 ATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 66221
| ||| | ||||||||| || | ||| ||||| | | ||||| || ||||| || ||
Sbjct 1206588 ACATCGTCATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTCCCACCT 1206529
Query 66222 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 66281
|| || | ||| | ||| ||||| || || || | |||||| |||| ||| ||||| ||
Sbjct 1206528 TGGTCGACGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATCCCATTCGAG 1206469
Query 66282 GTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTA--CTAATTGATAGAC 66339
|| || || || || | ||||| ||| | || || || ||| | | ||| | |
Sbjct 1206468 GTTCCGTTCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCACACTGA--GCC 1206411
Query 66340 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 66399
| || || || || || ||||| | ||||| | || | ||||| || || ||||
Sbjct 1206410 CAATCCCACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTAAATACCCT 1206351
Query 66400 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGA-CATTTGGTGACGACTAGTT 66458
| ||| ||| ||| ||||||| | || || || | || ||| || | ||||
Sbjct 1206350 CAATAGAATCGTCCTTCATGTTTACGAGGAAGCA-CGAGCTCATCTGAGGCTTTGGAGTT 1206292
Query 66459 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 66518
|| ||||| | ||||| || || ||||| || || |||| | || | || |||||
Sbjct 1206291 CCTGCATTGTACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGACATAAGGTTGTAA 1206232
Query 66519 GTCTCAATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACA 66576
||||| | || | ||| || || | |||||| || | | ||| ||||| | ||
Sbjct 1206231 GTCTCTACGACTTTGGGTATGTC--ATCGCCATGAATACCAATGGAGACGCGCATGATCA 1206174
Query 66577 TGTGCTGAGGTCTTTCAACGATCTTGTTG-TTTATTTTCAACAAGTAGGATTTTTCCAAA 66635
| |||||||| | || || ||| | |||| ||||| ||||||||| || |
Sbjct 1206173 TATGCTGAGGGCGCTCGT-GAACTTTTCCATTTAGTTTCAGCAAGTAGGAGCGCTCTAGC 1206115
Query 66636 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 66695
||||| ||||||||||||||||| ||||| || || |||| || | ||||||||
Sbjct 1206114 GTTTTGAAACCAAAATAGTTGTAATTGAAGTCACGATCATAAACGATGGCAGAGTTGAGC 1206055
Query 66696 TTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-----GAAATAATCGGAGAAT 66750
| || || || | || || || || |||| | ||||| || |||||||
Sbjct 1206054 TCTTCAGCATGCTTCTGGACAACGTC----GT-ATACCTCTTGGGAAATCATTGGAGAAT 1206000
Query 66751 GTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 66810
| || |||| |||||| |||||| ||| | |||||| || || | || || | ||
Sbjct 1205999 GCTTGTCATTGCGAGGATTCACATAGCGGAAAAGATCCTCAATGACCTGGCTGAACACTT 1205940
Query 66811 tttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCG 66870
||||||| | |||||| ||||| || || || |||| || || | |||||| || |
Sbjct 1205939 TTTTTGTCTGTTTGTGGAGATTAGACACTGCAATTCGTGCAGCAAGCTGGGCATAGTCAG 1205880
Query 66871 GATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAG 66910
| || ||||| | || ||| | ||||| |||||
Sbjct 1205879 GGTGGACCGTAGTCATTGACGCAGCTGTCTCGGCAGCCAG 1205840
Score = 156 bits (172), Expect = 6e-33
Identities = 365/547 (67%), Gaps = 8/547 (1%)
Strand=Plus/Minus
Query 36157 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 36216
||| || |||||| ||| | |||||| || | ||| | ||||||||| || || ||
Sbjct 897020 ACAGGCAAAATCGGTGTGCATACCCTCATCGCGCGAAATCAGTTCGTTGGAGAAAGTAAG 896961
Query 36217 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 36276
|| ||||| || ||||||||||| ||||| || || || ||||| || ||| |||||
Sbjct 896960 CCCAGGCATGAGCCCACGCTTTTTCAGCCAGAAGATTGATGCAAACGAGCCACTGAAGAA 896901
Query 36277 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATG 36333
| ||||| || || || |||||||| || | |||| | | | || |||
Sbjct 896900 GACACCTTCAACAGCAGCGAAGGCAATTAGGCGCTCTGCGAAGGTAGACTCAGCGTCGCT 896841
Query 36334 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 36393
||||| | ||||| | |||||||| | | || || || || || ||
Sbjct 896840 GATCCAACGAAGTGCCCACTTAGCCTTCTTGCGAATGGAGGGAATGGTGAAGATGGCGTT 896781
Query 36394 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 36453
|| ||| ||| || ||||| ||||| || ||||||||||||| |||| ||| |
Sbjct 896780 GAACAGAAAGTCGGCCTCTTTACTGTCTTTCACGTATGTATCAATCAGAAGAGAATAAGT 896721
Query 36454 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 36513
|| || ||||||||||| || || || || |||||||||||| | ||||||| |||
Sbjct 896720 CTCAGAGTGAATGTTTTCCATCATAATCTGGAAGCCGTAGAAACATTTGGCCTCGGGAAT 896661
Query 36514 CTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 36573
|| || || ||||| || | | ||| ||||| || || || ||||| || ||
Sbjct 896660 ACCAACCTCACCACTGAATCGCTCAACGAGATTCTCATTGACAATGCCATCACTAGCAGC 896601
Query 36574 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGT-TTGGTGTTAGTTT---ATTCC 36629
||| || || | ||| | | ||| ||| | |||| | || | || || | ||
Sbjct 896600 AAAGAAAGCAAGAACACGGGACACAAAGTATCTCTCGTCATCGT-TCAGCTTGTGCTCCC 896542
Query 36630 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 36689
| || | | || ||| || || | ||| || | ||||||||||| ||||| || |
Sbjct 896541 AGTCGTGAGTGTCCTTACCTAGGTCAATTTCCTCGGCCGTCCAAAATGACGCCTCGGCTT 896482
Query 36690 TTTTATA 36696
| || ||
Sbjct 896481 TCTTGTA 896475
Score = 98.7 bits (108), Expect = 1e-15
Identities = 148/207 (71%), Gaps = 4/207 (2%)
Strand=Plus/Minus
Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898
||||||||||| || || || |||| || || || ||||||||||| || || || ||
Sbjct 1207926 GTGAATTGAATCGGTGCCGAAGCGGCTTGAGTGCGCAGATAGTACATACCGGTCTTGAGC 1207867
Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG--GAATAACTCGGATCTGCTA 64956
|| | ||| ||||| || ||||||||||| || ||| | | |||| ||| |
Sbjct 1207866 CCTTTAGACCAGCCGTAGAAGTGCATACTCGTAAGCTTGCCCATTGTGGGGGAT-TGC-A 1207809
Query 64957 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 65016
||| ||| |||| | |||||||| |||||||| | ||| ||| | || ||||| | |
Sbjct 1207808 TATAGATGTTCAGACTCTGACTTTGGTCGATGAAAGGTCCTCTGCCAGCGGCCATATCGA 1207749
Query 65017 TGATCGTCTTTTGTGGAATTTCCCAAA 65043
| ||| |||||| || |||||||
Sbjct 1207748 TAATCACCTTTTGACTGATCTCCCAAA 1207722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172668365440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |