Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1 244 2e-59 >seq1 Length=2987201 Score = 244 bits (270), Expect = 2e-59 Identities = 734/1113 (66%), Gaps = 30/1113 (3%) Strand=Plus/Minus Query 79692 CTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 79751 ||| |||||||| | ||| | || || ||||| ||| |||||||| || || || Sbjct 1206937 CTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCAT 1206878 Query 79752 GAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCT 79810 ||| || ||||||| || |||||| || | ||| || | ||| | | || |||||| Sbjct 1206877 GAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAA-GCTTCTGAGCCT 1206819 Query 79811 TTATTATA-GACTTGTATCTCTTTTCTCTTTCGTA-TTGT-GTATATAATCGTTCGAACT 79867 |||| || ||| | || || |||| || || | ||| | | | || || | Sbjct 1206818 TTATGGTACGACGGCCCTTTCCAGCCT-TTTCATACTTCTCGTAAAGAGCC--TCAAATT 1206762 Query 79868 CGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTC 79927 | ||||| |||| || | | ||||| ||||||| || ||||| | | ||| || Sbjct 1206761 CATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATAAGTGTCCAATCAG 1206702 Query 79928 CATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 79987 |||| | || || || ||||| || ||||| ||||||||||| || || || ||||| | Sbjct 1206701 CATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGAAAAGATCGC 1206642 Query 79988 TGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAG 80047 | | | ||| || || || ||| || || |||| || | | | ||| Sbjct 1206641 GTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATAAAGTCGAACACATCGT 1206582 Query 80048 AATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTA 80107 ||||||||| || | ||| ||||| | | || || || ||||| || || || || | Sbjct 1206581 CATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTCCCACCTTGGTCGA 1206522 Query 80108 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCAT 80167 ||| | ||| ||||| || || || | |||||| |||| ||| ||||| || || || | Sbjct 1206521 CGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATCCCATTCGAGGTTCCGT 1206462 Query 80168 TGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTA--CTAATTGATAGACCTATTCC 80225 | || || | ||||| ||| | || || || ||| | | || || || || || Sbjct 1206461 TCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCACACTG--AGCCCAATCCC 1206404 Query 80226 CCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCT 80285 || || || ||||| | ||||| | || | ||||| || || ||||| || Sbjct 1206403 ACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTAAATACCCTCAATAGA 1206344 Query 80286 ATCATCAATCATGTTAAGTAGAAAACAGCTAG-ACATTTGGTGACGACTAGTTCCCGCAT 80344 ||| || ||||||| | || || || | || ||| || | |||||| |||| Sbjct 1206343 ATCGTCCTTCATGTTTACGAGGAAGCA-CGAGCTCATCTGAGGCTTTGGAGTTCCTGCAT 1206285 Query 80345 TAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAA 80404 | | ||||| || || ||||| || || |||| | |||| || ||||| ||||| | Sbjct 1206284 TGTACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGACATAAGGTTGTAAGTCTCTA 1206225 Query 80405 TAGCTGATTCTATATCCCATTG--ATGAATTCCTACCGCGACACGCATTAACATGTGCTG 80462 || || ||| ||| | |||||| || | | ||| ||||| | ||| ||||| Sbjct 1206224 CGACT--TTGGGTATGTCATCGCCATGAATACCAATGGAGACGCGCATGATCATATGCTG 1206167 Query 80463 AGGTCTTTCAACGATCTTGT-TATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAA 80521 ||| | || || ||| | ||||| ||||| |||||| || || | ||||| | Sbjct 1206166 AGGGCGCTC-GTGAACTTTTCCATTTAGTTTCAGCAAGTAGGAGCGCTCTAGCGTTTTGA 1206108 Query 80522 AACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCT 80581 |||||||||||||||| ||||| || || |||| || | |||||||| | || Sbjct 1206107 AACCAAAATAGTTGTAATTGAAGTCACGATCATAAACGATGGCAGAGTTGAGCTCTTCAG 1206048 Query 80582 TATATTTGTTAACTACATCCATGGTGATACTT-----GAAATAATCGGAGAATGTTTCCC 80636 || || | || || || || |||| | ||||| || |||||||| || | Sbjct 1206047 CATGCTTCTGGACAACGTC----GT-ATACCTCTTGGGAAATCATTGGAGAATGCTTGTC 1205993 Query 80637 ATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGT 80696 ||| |||||| |||||| ||| | |||||| || || | || || | ||||||||| Sbjct 1205992 ATTGCGAGGATTCACATAGCGGAAAAGATCCTCAATGACCTGGCTGAACACTTTTTTTGT 1205933 Query 80697 TTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTG 80756 | ||||| ||||| || || || |||| || || | |||||| || || || Sbjct 1205932 CTGTTTGTGGAGATTAGACACTGCAATTCGTGCAGCAAGCTGGGCATAGTCAGGGTGGAC 1205873 Query 80757 TGTAGTACAAGTGGCTGCTATTTCGGCTGCCAG 80789 ||||| | || ||| | ||||| ||||| Sbjct 1205872 CGTAGTCATTGACGCAGCTGTCTCGGCAGCCAG 1205840 Score = 194 bits (214), Expect = 2e-44 Identities = 575/879 (65%), Gaps = 12/879 (1%) Strand=Plus/Minus Query 49684 ACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAAC 49743 |||||||| || || ||||| || ||||| | | || || || ||||| || |||||| Sbjct 897295 ACACGTTTCTCAAAGAAATTGGTCTTTCCAGCAAGAGAGATGTTCTCCATAAAGTCAAAC 897236 Query 49744 GGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACA 49803 |||||||| ||||| || | || ||||| | | | ||| | || ||||| Sbjct 897235 GGATTGGTCACATTGTAGACGCGCTTGTGGCCCAAAGCCAACAGCAAACGGTCGGCGACG 897176 Query 49804 AATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGC- 49862 || || | |||| ||||| | || ||||| || | ||| | || || | ||| Sbjct 897175 AACTCGACATATTGGTTCATGAGGTCGGCGTTCATGCCGAGAAGACTTACAGGCAAAGCA 897116 Query 49863 -CGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCT-AACGGTT 49920 ||| | ||| | |||||| |||||| || || || || || || ||| |||| | Sbjct 897115 TCGCGG-AAGTA-TTCTTGCTCAATGTCGACGGCTTCAGTGATGATTC-TCTCAACGATA 897059 Query 49921 TCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGA 49980 | || || | | | || || | || | | ||| || |||||| ||||| | Sbjct 897058 GCACGGCTAGGGCGGTTCTGCAAGTGGCTGAATAGGAGACAGGCAAAATCGGTGTGCATA 896999 Query 49981 CCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 50040 ||||| || | ||| ||||||||||| || || || || ||||| || ||||||||| Sbjct 896998 CCCTCATCGCGCGAAATCAGTTCGTTGGAGAAAGTAAGCCCAGGCATGAGCCCACGCTTT 896939 Query 50041 TTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAG 50100 || ||||| || || || ||||| || ||| ||||||| ||||| || || || ||| Sbjct 896938 TTCAGCCAGAAGATTGATGCAAACGAGCCACTGAAGAAGACACCTTCAACAGCAGCGAAG 896879 Query 50101 GCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGTATCCACTTTTGAGCCCAATCG 50157 |||| || | |||| | | | | | ||| ||||| | ||||| | Sbjct 896878 GCAATTAGGCGCTCTGCGAAGGTAGACTCAGCGTCGCTGATCCAACGAAGTGCCCACTTA 896819 Query 50158 GCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTA 50217 |||||||| | | || || || ||||| || || ||| ||| || ||| Sbjct 896818 GCCTTCTTGCGAATGGAGGGAATGGTGAAGATGGCGTTGAACAGAAAGTCGGCCTCTTTA 896759 Query 50218 CTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATG 50277 || ||||| || || ||||| |||| |||| ||| | || || ||||||||||| || Sbjct 896758 CTGTCTTTCACGTATGTATCAATCAGAAGAGAATAAGTCTCAGAGTGAATGTTTTCCATC 896699 Query 50278 GCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGT 50337 ||||| || |||||||||||| | ||||||| ||| || || || ||||| Sbjct 896698 ATAATCTGGAAGCCGTAGAAACATTTGGCCTCGGGAATACCAACCTCACCACTGAATCGC 896639 Query 50338 TCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTT 50397 ||| | | ||| ||||| || || || ||||| || ||||| || || | ||| | Sbjct 896638 TCAACGAGATTCTCATTGACAATGCCATCACTAGCAGCAAAGAAAGCAAGAACACGGGAC 896579 Query 50398 ATAAAATGTTTTTCGTTGGGTGTTAGTTT---ATTCCAATCATTGATATCTTTAGATATA 50454 | ||| | | | |||| | || || | ||| || | | || ||| || Sbjct 896578 ACAAAGTATCTCTCGTCATCGTTCAGCTTGTGCTCCCAGTCGTGAGTGTCCTTACCTAGG 896519 Query 50455 TCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCA 50514 || | ||| || | ||||||||||| ||||| || || || || | ||| || Sbjct 896518 TCAATTTCCTCGGCCGTCCAAAATGACGCCTCGGCTTTCTTGTAAGCCTGCCAAATCGAG 896459 Query 50515 TGATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 50553 | || | ||| ||||| | |||||| | ||||||||| Sbjct 896458 TTGTACTTGATCGGGAACAAAACAAACCGGTTTGGATTT 896420 Score = 102 bits (112), Expect = 1e-16 Identities = 149/207 (72%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||||||||| || || || |||| || || || ||||||||||| || || || || Sbjct 1207926 GTGAATTGAATCGGTGCCGAAGCGGCTTGAGTGCGCAGATAGTACATACCGGTCTTGAGC 1207867 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTG--GAATAACTCGGATCTGCTA 78835 || | ||| |||||||| ||||||||||| || ||| | | |||| ||| | Sbjct 1207866 CCTTTAGACCAGCCGTAGAAGTGCATACTCGTAAGCTTGCCCATTGTGGGGGAT-TGC-A 1207809 Query 78836 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 78895 ||| ||| |||| | |||||||| |||||||| | ||| ||| | || ||||| | | Sbjct 1207808 TATAGATGTTCAGACTCTGACTTTGGTCGATGAAAGGTCCTCTGCCAGCGGCCATATCGA 1207749 Query 78896 TGATCGTCTTTTGTGGAATTTCCCAAA 78922 | ||| |||||| || ||||||| Sbjct 1207748 TAATCACCTTTTGACTGATCTCCCAAA 1207722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268656346240