Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq1 244 2e-59
>seq1
Length=2987201
Score = 244 bits (270), Expect = 2e-59
Identities = 734/1113 (66%), Gaps = 30/1113 (3%)
Strand=Plus/Minus
Query 79692 CTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 79751
||| |||||||| | ||| | || || ||||| ||| |||||||| || || ||
Sbjct 1206937 CTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCAT 1206878
Query 79752 GAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCT 79810
||| || ||||||| || |||||| || | ||| || | ||| | | || ||||||
Sbjct 1206877 GAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAA-GCTTCTGAGCCT 1206819
Query 79811 TTATTATA-GACTTGTATCTCTTTTCTCTTTCGTA-TTGT-GTATATAATCGTTCGAACT 79867
|||| || ||| | || || |||| || || | ||| | | | || || |
Sbjct 1206818 TTATGGTACGACGGCCCTTTCCAGCCT-TTTCATACTTCTCGTAAAGAGCC--TCAAATT 1206762
Query 79868 CGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTC 79927
| ||||| |||| || | | ||||| ||||||| || ||||| | | ||| ||
Sbjct 1206761 CATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATAAGTGTCCAATCAG 1206702
Query 79928 CATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 79987
|||| | || || || ||||| || ||||| ||||||||||| || || || ||||| |
Sbjct 1206701 CATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGAAAAGATCGC 1206642
Query 79988 TGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAG 80047
| | | ||| || || || ||| || || |||| || | | | |||
Sbjct 1206641 GTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATAAAGTCGAACACATCGT 1206582
Query 80048 AATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTA 80107
||||||||| || | ||| ||||| | | || || || ||||| || || || || |
Sbjct 1206581 CATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTCCCACCTTGGTCGA 1206522
Query 80108 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCAT 80167
||| | ||| ||||| || || || | |||||| |||| ||| ||||| || || || |
Sbjct 1206521 CGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATCCCATTCGAGGTTCCGT 1206462
Query 80168 TGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTA--CTAATTGATAGACCTATTCC 80225
| || || | ||||| ||| | || || || ||| | | || || || || ||
Sbjct 1206461 TCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCACACTG--AGCCCAATCCC 1206404
Query 80226 CCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCT 80285
|| || || ||||| | ||||| | || | ||||| || || ||||| ||
Sbjct 1206403 ACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTAAATACCCTCAATAGA 1206344
Query 80286 ATCATCAATCATGTTAAGTAGAAAACAGCTAG-ACATTTGGTGACGACTAGTTCCCGCAT 80344
||| || ||||||| | || || || | || ||| || | |||||| ||||
Sbjct 1206343 ATCGTCCTTCATGTTTACGAGGAAGCA-CGAGCTCATCTGAGGCTTTGGAGTTCCTGCAT 1206285
Query 80345 TAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAA 80404
| | ||||| || || ||||| || || |||| | |||| || ||||| ||||| |
Sbjct 1206284 TGTACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGACATAAGGTTGTAAGTCTCTA 1206225
Query 80405 TAGCTGATTCTATATCCCATTG--ATGAATTCCTACCGCGACACGCATTAACATGTGCTG 80462
|| || ||| ||| | |||||| || | | ||| ||||| | ||| |||||
Sbjct 1206224 CGACT--TTGGGTATGTCATCGCCATGAATACCAATGGAGACGCGCATGATCATATGCTG 1206167
Query 80463 AGGTCTTTCAACGATCTTGT-TATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAA 80521
||| | || || ||| | ||||| ||||| |||||| || || | ||||| |
Sbjct 1206166 AGGGCGCTC-GTGAACTTTTCCATTTAGTTTCAGCAAGTAGGAGCGCTCTAGCGTTTTGA 1206108
Query 80522 AACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCT 80581
|||||||||||||||| ||||| || || |||| || | |||||||| | ||
Sbjct 1206107 AACCAAAATAGTTGTAATTGAAGTCACGATCATAAACGATGGCAGAGTTGAGCTCTTCAG 1206048
Query 80582 TATATTTGTTAACTACATCCATGGTGATACTT-----GAAATAATCGGAGAATGTTTCCC 80636
|| || | || || || || |||| | ||||| || |||||||| || |
Sbjct 1206047 CATGCTTCTGGACAACGTC----GT-ATACCTCTTGGGAAATCATTGGAGAATGCTTGTC 1205993
Query 80637 ATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGT 80696
||| |||||| |||||| ||| | |||||| || || | || || | |||||||||
Sbjct 1205992 ATTGCGAGGATTCACATAGCGGAAAAGATCCTCAATGACCTGGCTGAACACTTTTTTTGT 1205933
Query 80697 TTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTG 80756
| ||||| ||||| || || || |||| || || | |||||| || || ||
Sbjct 1205932 CTGTTTGTGGAGATTAGACACTGCAATTCGTGCAGCAAGCTGGGCATAGTCAGGGTGGAC 1205873
Query 80757 TGTAGTACAAGTGGCTGCTATTTCGGCTGCCAG 80789
||||| | || ||| | ||||| |||||
Sbjct 1205872 CGTAGTCATTGACGCAGCTGTCTCGGCAGCCAG 1205840
Score = 194 bits (214), Expect = 2e-44
Identities = 575/879 (65%), Gaps = 12/879 (1%)
Strand=Plus/Minus
Query 49684 ACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAAC 49743
|||||||| || || ||||| || ||||| | | || || || ||||| || ||||||
Sbjct 897295 ACACGTTTCTCAAAGAAATTGGTCTTTCCAGCAAGAGAGATGTTCTCCATAAAGTCAAAC 897236
Query 49744 GGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACA 49803
|||||||| ||||| || | || ||||| | | | ||| | || |||||
Sbjct 897235 GGATTGGTCACATTGTAGACGCGCTTGTGGCCCAAAGCCAACAGCAAACGGTCGGCGACG 897176
Query 49804 AATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGC- 49862
|| || | |||| ||||| | || ||||| || | ||| | || || | |||
Sbjct 897175 AACTCGACATATTGGTTCATGAGGTCGGCGTTCATGCCGAGAAGACTTACAGGCAAAGCA 897116
Query 49863 -CGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCT-AACGGTT 49920
||| | ||| | |||||| |||||| || || || || || || ||| |||| |
Sbjct 897115 TCGCGG-AAGTA-TTCTTGCTCAATGTCGACGGCTTCAGTGATGATTC-TCTCAACGATA 897059
Query 49921 TCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGA 49980
| || || | | | || || | || | | ||| || |||||| ||||| |
Sbjct 897058 GCACGGCTAGGGCGGTTCTGCAAGTGGCTGAATAGGAGACAGGCAAAATCGGTGTGCATA 896999
Query 49981 CCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 50040
||||| || | ||| ||||||||||| || || || || ||||| || |||||||||
Sbjct 896998 CCCTCATCGCGCGAAATCAGTTCGTTGGAGAAAGTAAGCCCAGGCATGAGCCCACGCTTT 896939
Query 50041 TTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAG 50100
|| ||||| || || || ||||| || ||| ||||||| ||||| || || || |||
Sbjct 896938 TTCAGCCAGAAGATTGATGCAAACGAGCCACTGAAGAAGACACCTTCAACAGCAGCGAAG 896879
Query 50101 GCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGTATCCACTTTTGAGCCCAATCG 50157
|||| || | |||| | | | | | ||| ||||| | ||||| |
Sbjct 896878 GCAATTAGGCGCTCTGCGAAGGTAGACTCAGCGTCGCTGATCCAACGAAGTGCCCACTTA 896819
Query 50158 GCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTA 50217
|||||||| | | || || || ||||| || || ||| ||| || |||
Sbjct 896818 GCCTTCTTGCGAATGGAGGGAATGGTGAAGATGGCGTTGAACAGAAAGTCGGCCTCTTTA 896759
Query 50218 CTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATG 50277
|| ||||| || || ||||| |||| |||| ||| | || || ||||||||||| ||
Sbjct 896758 CTGTCTTTCACGTATGTATCAATCAGAAGAGAATAAGTCTCAGAGTGAATGTTTTCCATC 896699
Query 50278 GCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGT 50337
||||| || |||||||||||| | ||||||| ||| || || || |||||
Sbjct 896698 ATAATCTGGAAGCCGTAGAAACATTTGGCCTCGGGAATACCAACCTCACCACTGAATCGC 896639
Query 50338 TCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTT 50397
||| | | ||| ||||| || || || ||||| || ||||| || || | ||| |
Sbjct 896638 TCAACGAGATTCTCATTGACAATGCCATCACTAGCAGCAAAGAAAGCAAGAACACGGGAC 896579
Query 50398 ATAAAATGTTTTTCGTTGGGTGTTAGTTT---ATTCCAATCATTGATATCTTTAGATATA 50454
| ||| | | | |||| | || || | ||| || | | || ||| ||
Sbjct 896578 ACAAAGTATCTCTCGTCATCGTTCAGCTTGTGCTCCCAGTCGTGAGTGTCCTTACCTAGG 896519
Query 50455 TCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCA 50514
|| | ||| || | ||||||||||| ||||| || || || || | ||| ||
Sbjct 896518 TCAATTTCCTCGGCCGTCCAAAATGACGCCTCGGCTTTCTTGTAAGCCTGCCAAATCGAG 896459
Query 50515 TGATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 50553
| || | ||| ||||| | |||||| | |||||||||
Sbjct 896458 TTGTACTTGATCGGGAACAAAACAAACCGGTTTGGATTT 896420
Score = 102 bits (112), Expect = 1e-16
Identities = 149/207 (72%), Gaps = 4/207 (2%)
Strand=Plus/Minus
Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777
||||||||||| || || || |||| || || || ||||||||||| || || || ||
Sbjct 1207926 GTGAATTGAATCGGTGCCGAAGCGGCTTGAGTGCGCAGATAGTACATACCGGTCTTGAGC 1207867
Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTG--GAATAACTCGGATCTGCTA 78835
|| | ||| |||||||| ||||||||||| || ||| | | |||| ||| |
Sbjct 1207866 CCTTTAGACCAGCCGTAGAAGTGCATACTCGTAAGCTTGCCCATTGTGGGGGAT-TGC-A 1207809
Query 78836 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 78895
||| ||| |||| | |||||||| |||||||| | ||| ||| | || ||||| | |
Sbjct 1207808 TATAGATGTTCAGACTCTGACTTTGGTCGATGAAAGGTCCTCTGCCAGCGGCCATATCGA 1207749
Query 78896 TGATCGTCTTTTGTGGAATTTCCCAAA 78922
| ||| |||||| || |||||||
Sbjct 1207748 TAATCACCTTTTGACTGATCTCCCAAA 1207722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268656346240
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