Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq1 237 2e-57
>seq1
Length=2987201
Score = 237 bits (262), Expect = 2e-57
Identities = 711/1079 (66%), Gaps = 34/1079 (3%)
Strand=Plus/Minus
Query 71775 CTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 71834
|||||||||||| | ||| | || || ||||| ||| |||||||| || || ||
Sbjct 1206937 CTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCAT 1206878
Query 71835 AAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCT 71893
|| || ||||||| || |||||| || | ||| || | ||| | | || ||||||
Sbjct 1206877 GAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAA-GCTTCTGAGCCT 1206819
Query 71894 TTATTATATTCTTGTATCTCTTTTCTC---TTTCGTA-TTGT-GTATATAATCGTTCGAA 71948
|||| || | | |||| | |||| || || | ||| | | | || ||
Sbjct 1206818 TTATGGTACGACGG---CCCTTTCCAGCCTTTTCATACTTCTCGTAAAGAGCC--TCAAA 1206764
Query 71949 CTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTC 72008
|| ||||| || | | | | ||||| ||||| || || ||||| | || ||| ||
Sbjct 1206763 TTCATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATAAGTGTCCAATC 1206704
Query 72009 TCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATC 72068
|||| | || || || ||||| || ||||| ||||||||||| || || || |||||
Sbjct 1206703 AGCATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGAAAAGATC 1206644
Query 72069 TCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATC 72128
| | | | ||| || || || ||| || || |||| || | | | |||
Sbjct 1206643 GCGTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATAAAGTCGAACACATC 1206584
Query 72129 AGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATC 72188
||||||||| || | ||| ||||| | | || || || ||||| || || || ||
Sbjct 1206583 GTCATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTCCCACCTTGGTC 1206524
Query 72189 TATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACC 72248
| ||| | ||| ||||| || || || | |||||| |||| ||| ||||| || | ||
Sbjct 1206523 GACGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATCCCATTCGAGGTTCC 1206464
Query 72249 ATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATAT--TGCTAATTGATAGACCTATT 72306
|| || || | ||||| ||| | || || || | ||| | || || || ||
Sbjct 1206463 GTTCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCACACTG--AGCCCAATC 1206406
Query 72307 CCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATA 72366
|| || || || ||||| | ||||| | || | ||||| || || ||||| |||
Sbjct 1206405 CCACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTAAATACCCTCAATA 1206346
Query 72367 CTATCATCCATCATGTTAAGTAGAAAACAGCTAG-ACATTTGGTGACGACTAGTTCCCGC 72425
||| ||| ||||||| | || || || | || ||| || | |||||| ||
Sbjct 1206345 GAATCGTCCTTCATGTTTACGAGGAAGCA-CGAGCTCATCTGAGGCTTTGGAGTTCCTGC 1206287
Query 72426 ATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTC 72485
||| | ||||| || || ||||| || || |||| | |||| || ||||| |||||
Sbjct 1206286 ATTGTACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGACATAAGGTTGTAAGTCTC 1206227
Query 72486 AATAGCTGATTCTATATCCCATTG--ATGTATTCCTACCGCGACACGCATTAACATATGC 72543
| || || ||| ||| | ||| || || | | ||| ||||| | |||||||
Sbjct 1206226 TACGACT--TTGGGTATGTCATCGCCATGAATACCAATGGAGACGCGCATGATCATATGC 1206169
Query 72544 TGAGGTCTTTCAACGATCTTGT-TATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTT 72602
||||| | || || ||| | ||||| ||||| ||||||||| || | |||||
Sbjct 1206168 TGAGGGCGCTC-GTGAACTTTTCCATTTAGTTTCAGCAAGTAGGAGCGCTCTAGCGTTTT 1206110
Query 72603 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATC 72662
||||||||||||||||| ||||| || || |||| || | || ||||| | ||
Sbjct 1206109 GAAACCAAAATAGTTGTAATTGAAGTCACGATCATAAACGATGGCAGAGTTGAGCTCTTC 1206050
Query 72663 CTTATATTTGTTAACTATATCCATGGTGATACTT-----GAAATAATCGGAGAATGTTTC 72717
|| || | || | | | || |||| | ||||| || |||||||| ||
Sbjct 1206049 AGCATGCTTCTGGACAA----CGTCGT-ATACCTCTTGGGAAATCATTGGAGAATGCTTG 1205995
Query 72718 CCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttttt 72777
|||| |||||| |||||| ||| | |||||| || || | || || | |||||||
Sbjct 1205994 TCATTGCGAGGATTCACATAGCGGAAAAGATCCTCAATGACCTGGCTGAACACTTTTTTT 1205935
Query 72778 GTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836
|| | ||||| ||||| || || || |||| || || || |||||| || || ||
Sbjct 1205934 GTCTGTTTGTGGAGATTAGACACTGCAATTCGTGCAGCAAGCTGGGCATAGTCAGGGTG 1205876
Score = 190 bits (210), Expect = 3e-43
Identities = 574/878 (65%), Gaps = 10/878 (1%)
Strand=Plus/Minus
Query 41789 ACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTTCCATGAAATCAAAC 41848
|||||||| || || ||||| |||||||| | | || || || ||||| || ||||||
Sbjct 897295 ACACGTTTCTCAAAGAAATTGGTCTTTCCAGCAAGAGAGATGTTCTCCATAAAGTCAAAC 897236
Query 41849 GGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGATG 41908
|||||||| ||||| || | || ||||| | | | ||| | || |||| |
Sbjct 897235 GGATTGGTCACATTGTAGACGCGCTTGTGGCCCAAAGCCAACAGCAAACGGTCGGCGACG 897176
Query 41909 AATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCC 41968
|| || | |||| ||||| | || ||||| || | ||| | || || | |||
Sbjct 897175 AACTCGACATATTGGTTCATGAGGTCGGCGTTCATGCCGAGAAGACTTACAGGCAAAGCA 897116
Query 41969 ACA-GTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTC 42027
| | ||| | |||||| ||||| ||| || || || || || ||| | | |
Sbjct 897115 TCGCGGAAGTA-TTCTTGCTCAATGTCGACGGCTTCAGTGATGATTC-TCTCAACGATAG 897058
Query 42028 TTCA-CTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGAC 42086
| || || | | | || || | || | | ||| || |||||| ||||| ||
Sbjct 897057 CACGGCTAGGGCGGTTCTGCAAGTGGCTGAATAGGAGACAGGCAAAATCGGTGTGCATAC 896998
Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146
||||||| | ||| | ||||||||| || || || || ||||| || ||||||||||
Sbjct 896997 CCTCATCGCGCGAAATCAGTTCGTTGGAGAAAGTAAGCCCAGGCATGAGCCCACGCTTTT 896938
Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206
| ||||| || || || ||||| || ||| ||||||| ||||| || || || ||||
Sbjct 896937 TCAGCCAGAAGATTGATGCAAACGAGCCACTGAAGAAGACACCTTCAACAGCAGCGAAGG 896878
Query 42207 CAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACTTTTGAGCCCAATCGG 42263
|||| || | |||| | | | || ||| ||||| | ||||| | |
Sbjct 896877 CAATTAGGCGCTCTGCGAAGGTAGACTCAGCGTCGCTGATCCAACGAAGTGCCCACTTAG 896818
Query 42264 CCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTAC 42323
||||||| | | || || || ||||| || || ||| ||| || ||||
Sbjct 896817 CCTTCTTGCGAATGGAGGGAATGGTGAAGATGGCGTTGAACAGAAAGTCGGCCTCTTTAC 896758
Query 42324 TATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGG 42383
| ||||| || |||||||| |||| |||| ||| | || || ||||||||||| ||
Sbjct 896757 TGTCTTTCACGTATGTATCAATCAGAAGAGAATAAGTCTCAGAGTGAATGTTTTCCATCA 896698
Query 42384 CCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTT 42443
||||| || |||||||||||| ||||||||| || || || || ||||| |
Sbjct 896697 TAATCTGGAAGCCGTAGAAACATTTGGCCTCGGGAATACCAACCTCACCACTGAATCGCT 896638
Query 42444 CAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTA 42503
|| | | ||| || || || || || ||||| || ||||| || || | ||| | |
Sbjct 896637 CAACGAGATTCTCATTGACAATGCCATCACTAGCAGCAAAGAAAGCAAGAACACGGGACA 896578
Query 42504 TAAAATATTTTTCGTC--CGGTGTTAAT-TTATTCCAATCATTGATATCTTTAGATATAT 42560
||| ||| | ||||| || | | | | ||| || | | || ||| || |
Sbjct 896577 CAAAGTATCTCTCGTCATCGTTCAGCTTGTGCTCCCAGTCGTGAGTGTCCTTACCTAGGT 896518
Query 42561 CTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGATATCAT 42620
| | ||| || ||||||||||||| || || || || || || | ||| || |
Sbjct 896517 CAATTTCCTCGGCCGTCCAAAATGACGCCTCGGCTTTCTTGTAAGCCTGCCAAATCGAGT 896458
Query 42621 GATATTGAATTGGGAAAATAACAAATCTATTTGGATTT 42658
|| | || ||||| | |||||| | |||||||||
Sbjct 896457 TGTACTTGATCGGGAACAAAACAAACCGGTTTGGATTT 896420
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671139065772160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |