Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1 123 4e-23 >seq1 Length=2987201 Score = 123 bits (136), Expect = 4e-23 Identities = 326/482 (68%), Gaps = 22/482 (5%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 || || || || || || || || || | ||| ||||| | || || ||||| | || Sbjct 1206527 CAAGGTGGGAACAAGCGTCCTGGTGCCTTTGCCATCTACCTCGAGCCGTGGCATGACGAT 1206586 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || ||||||||||| |||||||||| ||| |||||| || || | || Sbjct 1206587 GTGTTCGACTTTATCGACCTGCGCAAAAATCACGGCAAGGAAGAGATTCGCGCACGCGAT 1206646 Query 96996 TTGTTTTATG-CACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCT- 97053 | ||| ||| | || ||| | || ||| ||||||||||||||||||| | ||| ||| Sbjct 1206647 CT-TTTCATGGCCCTTTGGATTCCCGATCTGTTCATGAAGCGCGTCAAAG-CGGATGCTG 1206704 Query 97054 ACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGT 97113 | |||| || ||||||||| || | || || || | || | || || || | Sbjct 1206705 ATTGGACACTTATGTGCCCCAACGAATGCCCTGGCCTTGCTGACGTTTACGGAGATGAAT 1206764 Query 97114 TTGAGGCCAAGTACACGGCCTACGAGCAAG------AGGGCCGATACGTGAGACGAGTCG 97167 ||||||| ||| | || || | | ||||||| ||| || | | Sbjct 1206765 TTGAGGCTCTTTACGAGAAGTATGAAAAGGCTGGAAAGGGCCGT--CGT---ACCA-TAA 1206818 Query 97168 ATGCACGAGAA-CTGTGGAAGGCCAT-CGTGACGGCTCAGGTAGAGACTGGAACTCCGTA 97225 | || | |||| || ||| | || || | ||| ||||||| |||||||| | || | Sbjct 1206819 AGGCTC-AGAAGCTTTGGTACGCTATTCTTGA-GGCTCAGACCGAGACTGGTAACCCCTT 1206876 Query 97226 CATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCA-ACGCCACTTGGGCACCATCA 97284 ||| |||||||||||| | | || ||||| |||||||| | | ||| || ||||||| Sbjct 1206877 CATGCTCTACAAGGATGCTGCCAACCGCAAGAGCAACCAGAAGAATCTT-GGAACCATCA 1206935 Query 97285 AGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTT 97344 || |||||||| |||| |||||||| ||||| | || || || ||||| || || | Sbjct 1206936 AGAGCTCCAATTTGTGTTGCGAAATTGTTGAGTATTCATCCCCTGAGGAGACTGCTGTGT 1206995 Query 97345 GC 97346 || Sbjct 1206996 GC 1206997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059051788160