Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq3 118 8e-22
>seq3
Length=2072284
Score = 118 bits (130), Expect = 8e-22
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 15151 TAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTC 15210
|| ||| ||||| || ||||| || ||||| |||||||| ||| ||| | | | ||
Sbjct 540860 TAGAACCAAATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGACCATC 540801
Query 15211 TTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTC 15270
|| | || |||||||| | || | ||| |||||||| ||||||||||| |||||
Sbjct 540800 GTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGGGGAATTCCTTCCTTGTC 540741
Query 15271 ACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330
| | || || ||||| ||| || ||||| |||||| ||||| |||| ||||||||
Sbjct 540740 AGAGATCTTACTCTTGACAGCCTCAATGGTGTCGCTAGACTCTACTTCTAGCGTAATGGT 540681
Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTG 15368
|| || || | || || | ||||| ||||| ||||
Sbjct 540680 CTTGCCCGTTAACGTCTTGATGAAAATCTGCATCTTTG 540643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362179129375056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |