Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 5e-12 >seq2 Length=2890200 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCT 48575 ||| || ||||| || |||||| ||||||||||| || | || || || | || | Sbjct 724340 CACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGA-AAGGGTGCGGCCATCAT 724398 Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635 | |||||||| ||| || | || | ||||||||| || ||| | | ||||| || Sbjct 724399 CAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTATCGC 724458 Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695 | || || ||| | || | | ||||| || | |||||| ||||| || || || | Sbjct 724459 TGATCTTGCTCTTCACAGCCTCGATGGTGTCACTCGACTCCACCTCGAGGGTAATAGTCT 724518 Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCATCGT 48729 |||| || || ||||| | || ||||||||||| Sbjct 724519 TACCCGTCAGGGTTTTAATGAAGATCTGCATCGT 724552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421251117856016