Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq1 217 2e-51
>seq1
Length=2987201
Score = 217 bits (240), Expect = 2e-51
Identities = 727/1113 (65%), Gaps = 30/1113 (3%)
Strand=Plus/Minus
Query 62969 CTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 63028
|||||| ||||| | ||| | || || ||||| ||| |||||||| || || ||
Sbjct 1206937 CTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCAT 1206878
Query 63029 GAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCT 63087
||| || ||||||| || |||||| || | ||| || | ||| | | || ||||||
Sbjct 1206877 GAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAA-GCTTCTGAGCCT 1206819
Query 63088 TTATTATA-GATTTGTATCTCCTTTCTCTTTCGTA--TAGTGTATACAATCGTTCGAACT 63144
|||| || || | ||| || |||| || | ||| | | | || || |
Sbjct 1206818 TTATGGTACGACGGCCCTTTCCAGCCT-TTTCATACTTCTCGTAAAGAGCC--TCAAATT 1206762
Query 63145 CGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTC 63204
| ||||| |||| | | | ||||| ||||| | || ||||| | | ||| ||
Sbjct 1206761 CATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATAAGTGTCCAATCAG 1206702
Query 63205 CGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 63264
| || | || || || ||||| || ||||| ||||||||||| || || || ||||| |
Sbjct 1206701 CATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGAAAAGATCGC 1206642
Query 63265 TGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAG 63324
| | | || || || || ||| || || |||| || | | | |||
Sbjct 1206641 GTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATAAAGTCGAACACATCGT 1206582
Query 63325 AATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTA 63384
||||||||| || | ||| ||||| | | ||||| || ||||| || || || || |
Sbjct 1206581 CATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTCCCACCTTGGTCGA 1206522
Query 63385 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCAT 63444
||| | ||| ||||| || || || | |||||| |||| ||| || || || | || |
Sbjct 1206521 CGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATCCCATTCGAGGTTCCGT 1206462
Query 63445 TGGTACCGGAGATATAGCTTCCACTGGCACGAATATTA--CTAATTGATAGACCTATTCC 63502
| ||||| | ||||| ||| | || || || ||| | | ||| | || || ||
Sbjct 1206461 TCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCACACTGA--GCCCAATCCC 1206404
Query 63503 CCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCT 63562
|| || || ||||| | ||||| | || | || || || |||||||| ||
Sbjct 1206403 ACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTAAATACCCTCAATAGA 1206344
Query 63563 ATCATCGATCATGTTAAGTAGAAAACAGCTAGA-CATTTGGTGACGACTAGTTCCCGCAT 63621
||| || ||||||| | || || || | || ||| || | |||||| ||||
Sbjct 1206343 ATCGTCCTTCATGTTTACGAGGAAGCA-CGAGCTCATCTGAGGCTTTGGAGTTCCTGCAT 1206285
Query 63622 TAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAA 63681
| | ||||| || || ||||| || || |||| | || | || ||||| ||||| |
Sbjct 1206284 TGTACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGACATAAGGTTGTAAGTCTCTA 1206225
Query 63682 TAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACATGTGCTG 63739
|| | ||| || || | |||||| || | | ||| ||||| | ||| |||||
Sbjct 1206224 CGACTTTGGGTATGTC--ATCGCCATGAATACCAATGGAGACGCGCATGATCATATGCTG 1206167
Query 63740 AGGTCTTTCAACGATCTTGTTG-TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAA 63798
||| | || || ||| | |||| ||||| ||||||||| || | ||||| |
Sbjct 1206166 AGGGCGCTCGT-GAACTTTTCCATTTAGTTTCAGCAAGTAGGAGCGCTCTAGCGTTTTGA 1206108
Query 63799 AACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCT 63858
|||||||||||||||| ||||| || || |||| || | |||||||| | ||
Sbjct 1206107 AACCAAAATAGTTGTAATTGAAGTCACGATCATAAACGATGGCAGAGTTGAGCTCTTCAG 1206048
Query 63859 TATATTTGTTAACTATATCCATGGTGATACTT-----GAAATAATCGGAGAATGTTTCCC 63913
|| || | || | | | || |||| | ||||| || |||||||| || |
Sbjct 1206047 CATGCTTCTGGACAA----CGTCGT-ATACCTCTTGGGAAATCATTGGAGAATGCTTGTC 1205993
Query 63914 ATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGT 63973
||| |||||| |||||| ||| | |||||| || || | || || | |||||||||
Sbjct 1205992 ATTGCGAGGATTCACATAGCGGAAAAGATCCTCAATGACCTGGCTGAACACTTTTTTTGT 1205933
Query 63974 TTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTG 64033
| ||||| ||||| || || || |||| || || || |||||| || || ||
Sbjct 1205932 CTGTTTGTGGAGATTAGACACTGCAATTCGTGCAGCAAGCTGGGCATAGTCAGGGTGGAC 1205873
Query 64034 TGTAGTACAAGTGGCTGCTATTTCGGCTGCCAG 64066
||||| | || ||| | ||||| |||||
Sbjct 1205872 CGTAGTCATTGACGCAGCTGTCTCGGCAGCCAG 1205840
Score = 214 bits (236), Expect = 2e-50
Identities = 594/903 (66%), Gaps = 26/903 (3%)
Strand=Plus/Minus
Query 33028 ACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAAC 33087
|||||||| || || ||||| || ||||| | | || || || ||||| || ||||||
Sbjct 897295 ACACGTTTCTCAAAGAAATTGGTCTTTCCAGCAAGAGAGATGTTCTCCATAAAGTCAAAC 897236
Query 33088 GGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACG 33147
|||||||| ||||| || | || ||||| | | | ||| | || ||||||
Sbjct 897235 GGATTGGTCACATTGTAGACGCGCTTGTGGCCCAAAGCCAACAGCAAACGGTCGGCGACG 897176
Query 33148 AATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGC- 33206
|| || | |||| ||||| | || ||||| || | ||| | || || | |||
Sbjct 897175 AACTCGACATATTGGTTCATGAGGTCGGCGTTCATGCCGAGAAGACTTACAGGCAAAGCA 897116
Query 33207 -CGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCT-AACGGTT 33264
||| | ||| | |||||| |||||| || || || || || || ||| |||| |
Sbjct 897115 TCGCGG-AAGTA-TTCTTGCTCAATGTCGACGGCTTCAGTGATGATTC-TCTCAACGATA 897059
Query 33265 TCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGA 33324
| || || | | | || || | || | | ||| || |||||| ||||| |
Sbjct 897058 GCACGGCTAGGGCGGTTCTGCAAGTGGCTGAATAGGAGACAGGCAAAATCGGTGTGCATA 896999
Query 33325 CCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 33384
||||| || | ||| ||||||||||| || || || || ||||| || |||||||||
Sbjct 896998 CCCTCATCGCGCGAAATCAGTTCGTTGGAGAAAGTAAGCCCAGGCATGAGCCCACGCTTT 896939
Query 33385 TTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAG 33444
|| ||||| || || || || || || ||| ||||||| ||||| || ||||| |||
Sbjct 896938 TTCAGCCAGAAGATTGATGCAAACGAGCCACTGAAGAAGACACCTTCAACAGCAGCGAAG 896879
Query 33445 GCAATAAGTCTCTCTCCATA---------ACCGGCGCTGTCATGTATCCACTTTTGAGCC 33495
||||| || | |||| | | | || ||||| ||||| | |||
Sbjct 896878 GCAATTAGGCGCTCTGCGAAGGTAGACTCAGCGTCGCTG------ATCCAACGAAGTGCC 896825
Query 33496 CAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttt 33555
|| | |||||||| | | || || || ||||| || || ||| |||
Sbjct 896824 CACTTAGCCTTCTTGCGAATGGAGGGAATGGTGAAGATGGCGTTGAACAGAAAGTCGGCC 896765
Query 33556 tCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTT 33615
|| ||||| ||||| || || ||||| |||| |||| ||| | || || |||||||||
Sbjct 896764 TCTTTACTGTCTTTCACGTATGTATCAATCAGAAGAGAATAAGTCTCAGAGTGAATGTTT 896705
Query 33616 TCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAA 33675
|| || ||||| || |||||||||||| | ||||||| ||| || || ||
Sbjct 896704 TCCATCATAATCTGGAAGCCGTAGAAACATTTGGCCTCGGGAATACCAACCTCACCACTG 896645
Query 33676 AATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACA 33735
||||| || | | ||| ||||| || || || ||||| || ||||| || || | |||
Sbjct 896644 AATCGCTCAACGAGATTCTCATTGACAATGCCATCACTAGCAGCAAAGAAAGCAAGAACA 896585
Query 33736 TGTTTTATAAAATATTTTTCGTC-TGGTGTTAGTTT---ATTCCAATCATTGATATCTTT 33791
| | ||| ||| | ||||| | || | || || | ||| || | | || ||
Sbjct 896584 CGGGACACAAAGTATCTCTCGTCATCGT-TCAGCTTGTGCTCCCAGTCGTGAGTGTCCTT 896526
Query 33792 AGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCA 33851
| || || | ||| || | ||||||||||| ||||| || || || || | |||
Sbjct 896525 ACCTAGGTCAATTTCCTCGGCCGTCCAAAATGACGCCTCGGCTTTCTTGTAAGCCTGCCA 896466
Query 33852 GATGTCATAATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTGCAAGGATGGG 33911
|| | || | ||| ||||| | |||||| | ||||||||| |||||||||
Sbjct 896465 AATCGAGTTGTACTTGATCGGGAACAAAACAAACCGGTTTGGATTTTCCTGAAGGATGGG 896406
Query 33912 TTC 33914
||
Sbjct 896405 CTC 896403
Score = 98.7 bits (108), Expect = 1e-15
Identities = 148/207 (71%), Gaps = 4/207 (2%)
Strand=Plus/Minus
Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054
||||||||||| || || || |||| || || || ||||||||||| || || || ||
Sbjct 1207926 GTGAATTGAATCGGTGCCGAAGCGGCTTGAGTGCGCAGATAGTACATACCGGTCTTGAGC 1207867
Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG--GAATAACTCGGATCTGCTA 62112
|| | ||| ||||| || ||||||||||| || ||| | | |||| ||| |
Sbjct 1207866 CCTTTAGACCAGCCGTAGAAGTGCATACTCGTAAGCTTGCCCATTGTGGGGGAT-TGC-A 1207809
Query 62113 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 62172
||| ||| |||| | |||||||| |||||||| | ||| ||| | || ||||| | |
Sbjct 1207808 TATAGATGTTCAGACTCTGACTTTGGTCGATGAAAGGTCCTCTGCCAGCGGCCATATCGA 1207749
Query 62173 TGATCGTCTTTTGTGGAATTTCCCAAA 62199
| ||| |||||| || |||||||
Sbjct 1207748 TAATCACCTTTTGACTGATCTCCCAAA 1207722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622947075410560
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