Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01] 16 sequences; 9,561,028 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1 217 2e-51 >seq1 Length=2987201 Score = 217 bits (240), Expect = 2e-51 Identities = 727/1113 (65%), Gaps = 30/1113 (3%) Strand=Plus/Minus Query 62969 CTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 63028 |||||| ||||| | ||| | || || ||||| ||| |||||||| || || || Sbjct 1206937 CTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCAT 1206878 Query 63029 GAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCT 63087 ||| || ||||||| || |||||| || | ||| || | ||| | | || |||||| Sbjct 1206877 GAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAA-GCTTCTGAGCCT 1206819 Query 63088 TTATTATA-GATTTGTATCTCCTTTCTCTTTCGTA--TAGTGTATACAATCGTTCGAACT 63144 |||| || || | ||| || |||| || | ||| | | | || || | Sbjct 1206818 TTATGGTACGACGGCCCTTTCCAGCCT-TTTCATACTTCTCGTAAAGAGCC--TCAAATT 1206762 Query 63145 CGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTC 63204 | ||||| |||| | | | ||||| ||||| | || ||||| | | ||| || Sbjct 1206761 CATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATAAGTGTCCAATCAG 1206702 Query 63205 CGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 63264 | || | || || || ||||| || ||||| ||||||||||| || || || ||||| | Sbjct 1206701 CATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGAAAAGATCGC 1206642 Query 63265 TGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAG 63324 | | | || || || || ||| || || |||| || | | | ||| Sbjct 1206641 GTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATAAAGTCGAACACATCGT 1206582 Query 63325 AATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTA 63384 ||||||||| || | ||| ||||| | | ||||| || ||||| || || || || | Sbjct 1206581 CATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTCCCACCTTGGTCGA 1206522 Query 63385 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCAT 63444 ||| | ||| ||||| || || || | |||||| |||| ||| || || || | || | Sbjct 1206521 CGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATCCCATTCGAGGTTCCGT 1206462 Query 63445 TGGTACCGGAGATATAGCTTCCACTGGCACGAATATTA--CTAATTGATAGACCTATTCC 63502 | ||||| | ||||| ||| | || || || ||| | | ||| | || || || Sbjct 1206461 TCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCACACTGA--GCCCAATCCC 1206404 Query 63503 CCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCT 63562 || || || ||||| | ||||| | || | || || || |||||||| || Sbjct 1206403 ACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTAAATACCCTCAATAGA 1206344 Query 63563 ATCATCGATCATGTTAAGTAGAAAACAGCTAGA-CATTTGGTGACGACTAGTTCCCGCAT 63621 ||| || ||||||| | || || || | || ||| || | |||||| |||| Sbjct 1206343 ATCGTCCTTCATGTTTACGAGGAAGCA-CGAGCTCATCTGAGGCTTTGGAGTTCCTGCAT 1206285 Query 63622 TAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAA 63681 | | ||||| || || ||||| || || |||| | || | || ||||| ||||| | Sbjct 1206284 TGTACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGACATAAGGTTGTAAGTCTCTA 1206225 Query 63682 TAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACATGTGCTG 63739 || | ||| || || | |||||| || | | ||| ||||| | ||| ||||| Sbjct 1206224 CGACTTTGGGTATGTC--ATCGCCATGAATACCAATGGAGACGCGCATGATCATATGCTG 1206167 Query 63740 AGGTCTTTCAACGATCTTGTTG-TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAA 63798 ||| | || || ||| | |||| ||||| ||||||||| || | ||||| | Sbjct 1206166 AGGGCGCTCGT-GAACTTTTCCATTTAGTTTCAGCAAGTAGGAGCGCTCTAGCGTTTTGA 1206108 Query 63799 AACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCT 63858 |||||||||||||||| ||||| || || |||| || | |||||||| | || Sbjct 1206107 AACCAAAATAGTTGTAATTGAAGTCACGATCATAAACGATGGCAGAGTTGAGCTCTTCAG 1206048 Query 63859 TATATTTGTTAACTATATCCATGGTGATACTT-----GAAATAATCGGAGAATGTTTCCC 63913 || || | || | | | || |||| | ||||| || |||||||| || | Sbjct 1206047 CATGCTTCTGGACAA----CGTCGT-ATACCTCTTGGGAAATCATTGGAGAATGCTTGTC 1205993 Query 63914 ATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGT 63973 ||| |||||| |||||| ||| | |||||| || || | || || | ||||||||| Sbjct 1205992 ATTGCGAGGATTCACATAGCGGAAAAGATCCTCAATGACCTGGCTGAACACTTTTTTTGT 1205933 Query 63974 TTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTG 64033 | ||||| ||||| || || || |||| || || || |||||| || || || Sbjct 1205932 CTGTTTGTGGAGATTAGACACTGCAATTCGTGCAGCAAGCTGGGCATAGTCAGGGTGGAC 1205873 Query 64034 TGTAGTACAAGTGGCTGCTATTTCGGCTGCCAG 64066 ||||| | || ||| | ||||| ||||| Sbjct 1205872 CGTAGTCATTGACGCAGCTGTCTCGGCAGCCAG 1205840 Score = 214 bits (236), Expect = 2e-50 Identities = 594/903 (66%), Gaps = 26/903 (3%) Strand=Plus/Minus Query 33028 ACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAAC 33087 |||||||| || || ||||| || ||||| | | || || || ||||| || |||||| Sbjct 897295 ACACGTTTCTCAAAGAAATTGGTCTTTCCAGCAAGAGAGATGTTCTCCATAAAGTCAAAC 897236 Query 33088 GGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACG 33147 |||||||| ||||| || | || ||||| | | | ||| | || |||||| Sbjct 897235 GGATTGGTCACATTGTAGACGCGCTTGTGGCCCAAAGCCAACAGCAAACGGTCGGCGACG 897176 Query 33148 AATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGC- 33206 || || | |||| ||||| | || ||||| || | ||| | || || | ||| Sbjct 897175 AACTCGACATATTGGTTCATGAGGTCGGCGTTCATGCCGAGAAGACTTACAGGCAAAGCA 897116 Query 33207 -CGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCT-AACGGTT 33264 ||| | ||| | |||||| |||||| || || || || || || ||| |||| | Sbjct 897115 TCGCGG-AAGTA-TTCTTGCTCAATGTCGACGGCTTCAGTGATGATTC-TCTCAACGATA 897059 Query 33265 TCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGA 33324 | || || | | | || || | || | | ||| || |||||| ||||| | Sbjct 897058 GCACGGCTAGGGCGGTTCTGCAAGTGGCTGAATAGGAGACAGGCAAAATCGGTGTGCATA 896999 Query 33325 CCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 33384 ||||| || | ||| ||||||||||| || || || || ||||| || ||||||||| Sbjct 896998 CCCTCATCGCGCGAAATCAGTTCGTTGGAGAAAGTAAGCCCAGGCATGAGCCCACGCTTT 896939 Query 33385 TTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAG 33444 || ||||| || || || || || || ||| ||||||| ||||| || ||||| ||| Sbjct 896938 TTCAGCCAGAAGATTGATGCAAACGAGCCACTGAAGAAGACACCTTCAACAGCAGCGAAG 896879 Query 33445 GCAATAAGTCTCTCTCCATA---------ACCGGCGCTGTCATGTATCCACTTTTGAGCC 33495 ||||| || | |||| | | | || ||||| ||||| | ||| Sbjct 896878 GCAATTAGGCGCTCTGCGAAGGTAGACTCAGCGTCGCTG------ATCCAACGAAGTGCC 896825 Query 33496 CAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttt 33555 || | |||||||| | | || || || ||||| || || ||| ||| Sbjct 896824 CACTTAGCCTTCTTGCGAATGGAGGGAATGGTGAAGATGGCGTTGAACAGAAAGTCGGCC 896765 Query 33556 tCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTT 33615 || ||||| ||||| || || ||||| |||| |||| ||| | || || ||||||||| Sbjct 896764 TCTTTACTGTCTTTCACGTATGTATCAATCAGAAGAGAATAAGTCTCAGAGTGAATGTTT 896705 Query 33616 TCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAA 33675 || || ||||| || |||||||||||| | ||||||| ||| || || || Sbjct 896704 TCCATCATAATCTGGAAGCCGTAGAAACATTTGGCCTCGGGAATACCAACCTCACCACTG 896645 Query 33676 AATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACA 33735 ||||| || | | ||| ||||| || || || ||||| || ||||| || || | ||| Sbjct 896644 AATCGCTCAACGAGATTCTCATTGACAATGCCATCACTAGCAGCAAAGAAAGCAAGAACA 896585 Query 33736 TGTTTTATAAAATATTTTTCGTC-TGGTGTTAGTTT---ATTCCAATCATTGATATCTTT 33791 | | ||| ||| | ||||| | || | || || | ||| || | | || || Sbjct 896584 CGGGACACAAAGTATCTCTCGTCATCGT-TCAGCTTGTGCTCCCAGTCGTGAGTGTCCTT 896526 Query 33792 AGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCA 33851 | || || | ||| || | ||||||||||| ||||| || || || || | ||| Sbjct 896525 ACCTAGGTCAATTTCCTCGGCCGTCCAAAATGACGCCTCGGCTTTCTTGTAAGCCTGCCA 896466 Query 33852 GATGTCATAATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTGCAAGGATGGG 33911 || | || | ||| ||||| | |||||| | ||||||||| ||||||||| Sbjct 896465 AATCGAGTTGTACTTGATCGGGAACAAAACAAACCGGTTTGGATTTTCCTGAAGGATGGG 896406 Query 33912 TTC 33914 || Sbjct 896405 CTC 896403 Score = 98.7 bits (108), Expect = 1e-15 Identities = 148/207 (71%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 ||||||||||| || || || |||| || || || ||||||||||| || || || || Sbjct 1207926 GTGAATTGAATCGGTGCCGAAGCGGCTTGAGTGCGCAGATAGTACATACCGGTCTTGAGC 1207867 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG--GAATAACTCGGATCTGCTA 62112 || | ||| ||||| || ||||||||||| || ||| | | |||| ||| | Sbjct 1207866 CCTTTAGACCAGCCGTAGAAGTGCATACTCGTAAGCTTGCCCATTGTGGGGGAT-TGC-A 1207809 Query 62113 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 62172 ||| ||| |||| | |||||||| |||||||| | ||| ||| | || ||||| | | Sbjct 1207808 TATAGATGTTCAGACTCTGACTTTGGTCGATGAAAGGTCCTCTGCCAGCGGCCATATCGA 1207749 Query 62173 TGATCGTCTTTTGTGGAATTTCCCAAA 62199 | ||| |||||| || ||||||| Sbjct 1207748 TAATCACCTTTTGACTGATCTCCCAAA 1207722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947075410560