Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq1 242 5e-59
>seq1
Length=2987201
Score = 242 bits (268), Expect = 5e-59
Identities = 736/1120 (66%), Gaps = 44/1120 (4%)
Strand=Plus/Minus
Query 62824 CTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 62883
|||||||||||| | ||| | || || ||||| ||| |||||||| || || ||
Sbjct 1206937 CTTGATGGTTCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGCAT 1206878
Query 62884 GAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCT 62942
||| || ||||||| || |||||| || | ||| || | ||| | | || ||||||
Sbjct 1206877 GAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGAATAGCGTACCAAA-GCTTCTGAGCCT 1206819
Query 62943 TTATTATA-GA------TTTGTATCTCTTTTCT--CTT-TCGTATAGTGTATACAATCGT 62992
|||| || || ||| | | |||||| ||| ||||| || | | |||
Sbjct 1206818 TTATGGTACGACGGCCCTTTCCAGC-CTTTTCATACTTCTCGTAAAGAGCCTCAAAT--- 1206763
Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052
|| ||||| |||| | | || ||||| ||||| | || ||||| | | |
Sbjct 1206762 ------TCATCTCCGTAAACGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATAAGTGTC 1206709
Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112
|| || | || | || || || ||||| || ||||| ||||||||||| || || ||
Sbjct 1206708 CAATCAGCATCCGCTTTGACGCGCTTCATGAACAGATCGGGAATCCAAAGGGCCATGAAA 1206649
Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63172
||||| | | | | || || || || ||| || || |||| || | |
Sbjct 1206648 AGATCGCGTGCGCGAATCTCTTCCTTGCCGTGATTTTTGCGCAGGTCGATAAAGTCGAAC 1206589
Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63232
| ||| ||||||||| || | ||| ||||| | | ||||| || ||||| || ||
Sbjct 1206588 ACATCGTCATGCCACGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTCCCACCT 1206529
Query 63233 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 63292
|| || | ||| | ||| ||||| || || || | |||||| |||| ||| ||||| ||
Sbjct 1206528 TGGTCGACGTAACGAGCAGTGTTGTTGTACACACGCAACATGGGAAGAATCCCATTCGAG 1206469
Query 63293 GTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTA--CTAATTGATAGAC 63350
|| || || || || | ||||| ||| | || || || ||| | | ||| | |
Sbjct 1206468 GTTCCGTTCGTACCAGCTATATATGAGCCAGTAGCGCGGATGTTATGCACACTGA--GCC 1206411
Query 63351 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 63410
| || || || || || ||||| | ||||| | || | ||||| || || ||||
Sbjct 1206410 CAATCCCACCGGCAGACTTCGAGATGAGCGCGCAGCTCTTCAGAGTATCGTAAATACCCT 1206351
Query 63411 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGA-CATTTGGTGACGACTAGTT 63469
| ||| ||| ||| ||||||| | || || || | || ||| || | ||||
Sbjct 1206350 CAATAGAATCGTCCTTCATGTTTACGAGGAAGCA-CGAGCTCATCTGAGGCTTTGGAGTT 1206292
Query 63470 CCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTAC 63529
|| ||||| | ||||| || || ||||| || || |||| | || | || |||||
Sbjct 1206291 CCTGCATTGTACAAGGTGGGCGAGGCGTGGGTGAAGTATTTGTTGGACATAAGGTTGTAA 1206232
Query 63530 GTCTCAATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACA 63587
||||| | || | ||| || || | |||||| || | | ||| ||||| | ||
Sbjct 1206231 GTCTCTACGACTTTGGGTATGTC--ATCGCCATGAATACCAATGGAGACGCGCATGATCA 1206174
Query 63588 TGTGCTGAGGTCTTTCAACGATCTTGTTG-TTTATTTTCAACAAGTAGGATTTTTCCAAA 63646
| |||||||| | || || ||| | |||| ||||| ||||||||| || |
Sbjct 1206173 TATGCTGAGGGCGCTCGT-GAACTTTTCCATTTAGTTTCAGCAAGTAGGAGCGCTCTAGC 1206115
Query 63647 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 63706
||||| ||||||||||||||||| ||||| || || |||| || | ||||||||
Sbjct 1206114 GTTTTGAAACCAAAATAGTTGTAATTGAAGTCACGATCATAAACGATGGCAGAGTTGAGC 1206055
Query 63707 TTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-----GAAATAATAGGAAAAT 63761
| || || || | || || || || |||| | ||||| || ||| |||
Sbjct 1206054 TCTTCAGCATGCTTCTGGACAACGTC----GT-ATACCTCTTGGGAAATCATTGGAGAAT 1206000
Query 63762 GTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 63821
| || |||| |||||| |||||| ||| | |||||| || || | || || | ||
Sbjct 1205999 GCTTGTCATTGCGAGGATTCACATAGCGGAAAAGATCCTCAATGACCTGGCTGAACACTT 1205940
Query 63822 tttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCG 63881
||||||| | |||||| ||||| || || || |||| || || || |||||| || |
Sbjct 1205939 TTTTTGTCTGTTTGTGGAGATTAGACACTGCAATTCGTGCAGCAAGCTGGGCATAGTCAG 1205880
Query 63882 GATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAG 63921
| || ||||| | || ||| | ||||| |||||
Sbjct 1205879 GGTGGACCGTAGTCATTGACGCAGCTGTCTCGGCAGCCAG 1205840
Score = 158 bits (174), Expect = 2e-33
Identities = 411/625 (66%), Gaps = 20/625 (3%)
Strand=Plus/Minus
Query 32660 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 32719
||| || |||||| ||| | |||||| || | ||| | ||||||||| || || ||
Sbjct 897020 ACAGGCAAAATCGGTGTGCATACCCTCATCGCGCGAAATCAGTTCGTTGGAGAAAGTAAG 896961
Query 32720 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 32779
|| ||||| || ||||||||||| ||||| || || || ||||| || ||| |||||
Sbjct 896960 CCCAGGCATGAGCCCACGCTTTTTCAGCCAGAAGATTGATGCAAACGAGCCACTGAAGAA 896901
Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---------ACCGGCGCT 32830
| ||||| || || || |||||||| || | |||| | | | || ||||
Sbjct 896900 GACACCTTCAACAGCAGCGAAGGCAATTAGGCGCTCTGCGAAGGTAGACTCAGCGTCGCT 896841
Query 32831 GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTAT 32890
| ||||| | ||||| | |||||||| | | || || || ||
Sbjct 896840 G------ATCCAACGAAGTGCCCACTTAGCCTTCTTGCGAATGGAGGGAATGGTGAAGAT 896787
Query 32891 AGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACT 32950
|| || || ||| ||| || ||||| ||||| || ||||||||||||| ||||
Sbjct 896786 GGCGTTGAACAGAAAGTCGGCCTCTTTACTGTCTTTCACGTATGTATCAATCAGAAGAGA 896727
Query 32951 ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTC 33010
||| | || || ||||||||||| || || || || |||||||| ||| | |||||
Sbjct 896726 ATAAGTCTCAGAGTGAATGTTTTCCATCATAATCTGGAAGCCGTAGAAACATTTGGCCTC 896667
Query 33011 GGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACT 33070
|| ||| || || || ||||| || | | ||| ||||| || || || |||||
Sbjct 896666 GGGAATACCAACCTCACCACTGAATCGCTCAACGAGATTCTCATTGACAATGCCATCACT 896607
Query 33071 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC-TGGTGTTAGTTT-- 33127
|| ||||| || || | ||| | | ||| ||| | ||||| | || | || ||
Sbjct 896606 AGCAGCAAAGAAAGCAAGAACACGGGACACAAAGTATCTCTCGTCATCGT-TCAGCTTGT 896548
Query 33128 -ATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 33186
| ||| || | | || ||| || || | ||| || | ||||||||||| ||||
Sbjct 896547 GCTCCCAGTCGTGAGTGTCCTTACCTAGGTCAATTTCCTCGGCCGTCCAAAATGACGCCT 896488
Query 33187 CTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTAT 33246
| || || || || | ||| || | || | || || || | |||||| | |
Sbjct 896487 CGGCTTTCTTGTAAGCCTGCCAAATCGAGTTGTACTTGATCGGGAACAAAACAAACCGGT 896428
Query 33247 TTGGATTTTTTGCAAGGATTGGTTC 33271
||||||||| |||||| || ||
Sbjct 896427 TTGGATTTTCCTGAAGGATGGGCTC 896403
Score = 102 bits (112), Expect = 1e-16
Identities = 149/207 (72%), Gaps = 4/207 (2%)
Strand=Plus/Minus
Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909
||||||||||| || || || |||| || || || ||||||||||| || || || ||
Sbjct 1207926 GTGAATTGAATCGGTGCCGAAGCGGCTTGAGTGCGCAGATAGTACATACCGGTCTTGAGC 1207867
Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG--GAATAACTCGGATCTGCTA 61967
|| | ||| ||||| || ||||||||||| || ||| | | |||| ||| |
Sbjct 1207866 CCTTTAGACCAGCCGTAGAAGTGCATACTCGTAAGCTTGCCCATTGTGGGGGAT-TGC-A 1207809
Query 61968 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 62027
||| ||| |||| | |||||||| |||||||| | ||| ||| | || ||||| | |
Sbjct 1207808 TATAGATGTTCAGACTCTGACTTTGGTCGATGAAAGGTCCTCTGCCAGCGGCCATATCGA 1207749
Query 62028 TAATCGTCTTTTGTGGAATTTCCCAAA 62054
||||| |||||| || |||||||
Sbjct 1207748 TAATCACCTTTTGACTGATCTCCCAAA 1207722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631873273600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |