Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq3 122 8e-23
>seq3
Length=2072284
Score = 122 bits (134), Expect = 8e-23
Identities = 166/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || | ||||| || || || || |||| || | ||||| |||||
Sbjct 540648 ATGCAGATTTTCATCAAGACGTTAACGGGCAAGACCATTACGCTAGAAGTAGAGTCTAGC 540707
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || ||| | | ||| || ||| ||||||| ||||| ||||| |||||||||
Sbjct 540708 GACACCATTGAGGCTGTCAAGAGTAAGATCTCTGACAAGGAAGGAATTCCCCCTGACCAA 540767
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || ||||| ||||| || | || |||| ||| ||| | ||| |||||
Sbjct 540768 CAGCGTCTCATCTTTGCTGGCAAGCAGCTTGACGATGGTCGTACTCTTTCCGACTACAAC 540827
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATT 25230
|| ||||| || ||||| || ||||| || ||| | || | || || ||||
Sbjct 540828 ATCCAAAAGGAGTCCACTCTGCATTTGGTTCTACGTCTCCGTGGCGGCAATT 540879
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327915501040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |