Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Starmerella_20bombicola_20[genbank_20GCA_5F001599315.1_202016-03-01]
16 sequences; 9,561,028 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 9e-17
>seq1
Length=2987201
Score = 102 bits (112), Expect = 9e-17
Identities = 352/546 (64%), Gaps = 5/546 (1%)
Strand=Plus/Minus
Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151
|| ||||| ||||| || | ||| || || || || |||| || ||| ||| || |
Sbjct 897019 CAGGCAAAATCGGTGTGCATACCCTCATCGCGCGAAATCAGTTCGTTGGAGAAAGTAAGC 896960
Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211
|| || | || || || || || ||||| || ||||| ||||| ||| || ||
Sbjct 896959 CCAGGCATGAGCCCACGCTTTTTCAGCCAGAAGATTGATGCAAACGAGCCACTGAAGAAG 896900
Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTG 93271
| |||||| || || || || || | | || || || || | | | ||||
Sbjct 896899 ACACCTTCAACAGCAGCGAAGGCAATTAGGCGCTCTGCGAAGGTAGACTCAGCGTCGCTG 896840
Query 93272 ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTA 93331
||||| | ||||| | || || || ||| | || | || ||| |||||
Sbjct 896839 ATCCAACGAAGTGCCCACTTAGCCTTCTTGCGAATGGAGGGAATGGTGAAGATGGCGTTG 896780
Query 93332 AATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATT 93391
|| || | || ||| | ||| | ||||||||| || | |||||||| |
Sbjct 896779 AACAGAAAGTCGGCCTCTTTACTGTCTTTCACGTATGTATCAATCAGAAGAGAATAAGTC 896720
Query 93392 TCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATC 93451
||||| || | || ||||| ||| ||||| |||||||||||| | || || | ||
Sbjct 896719 TCAGAGTGAATGTTTTCCATCATAATCTGGAAGCCGTAGAAACATTTGGCCTCGGGAATA 896660
Query 93452 TGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCa 93511
|| || | |||| ||| |||||||| |||||||| || ||||| || |||
Sbjct 896659 CCAACCTCACCACTGAATCGCTCAACGAGATTCTCATTGACAATGCCATCACTAGCAGCA 896600
Query 93512 aaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTT---ATCCCAA 93568
|| ||||| | | | | | ||| | | |||| ||||| || ||||| |||||
Sbjct 896599 AAGAAAGCAAGAACACGGGACACAAAGTATCTCTCGTCATCGTTCAGCTTGTGCTCCCAG 896540
Query 93569 TCG-GATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTT 93627
||| || | || || || || | ||| ||| | |||||||| || || || |||||
Sbjct 896539 TCGTGAGTG-TCCTTACCTAGGTCAATTTCCTCGGCCGTCCAAAATGACGCCTCGGCTTT 896481
Query 93628 TTTGTA 93633
|||||
Sbjct 896480 CTTGTA 896475
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860688627840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |